Profile of regulator GntR in Comamonadaceae
Properties
| Regulator family: |
LacI |
| Regulation mode: |
repressor |
| Biological process: |
Gluconate utilization |
| Effector: |
Gluconate |
| Regulog: |
GntR - Comamonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Acidovorax avenae subsp. citrulli AAC00-1
|
|
Aave_2797 |
gntK |
-109 |
6.1 |
CTAGGATAGCGCTATCTTGC |
|
Aave_2798 |
gntR |
-55 |
6.1 |
GCAAGATAGCGCTATCCTAG |
|
Aave_2798 |
gntR |
-172 |
6.1 |
CTTGGATAGCGCTATCCGTT |
|
Acidovorax sp. JS42
|
|
Ajs_2054 |
gntR |
-55 |
6 |
GAAAGATAGCGCTATCTTAA |
|
Ajs_2054 |
gntR |
-219 |
6 |
TCAAGATAGCGCTATCTTTA |
|
Ajs_2053 |
gntK |
-180 |
6 |
TTAAGATAGCGCTATCTTTC |
|
Comamonas testosteroni KF-1
|
|
CtesDRAFT_0562 |
gntR |
-181 |
6.3 |
TTTGGATAGCGCTATCCGAT |
|
CtesDRAFT_0562 |
gntR |
-55 |
6 |
TCCGGATAGCGCTATCATAA |
|
CtesDRAFT_0561 |
gntK |
-21 |
6.3 |
ATCGGATAGCGCTATCCAAA |
|
CtesDRAFT_0561 |
gntK |
-147 |
6 |
TTATGATAGCGCTATCCGGA |
|
Delftia acidovorans SPH-1
|
|
Daci_3761 |
gntK |
-120 |
6.3 |
TTATGATAGCGCTATCCCAA |
|
Daci_3760 |
gntR |
-175 |
6.2 |
TTGGGATAGCGCTATCCATG |
|
Daci_3760 |
gntR |
-56 |
6.3 |
TTGGGATAGCGCTATCATAA |
|
Polaromonas naphthalenivorans CJ2
|
|
Pnap_0047 |
gntR |
-128 |
6.1 |
CTTGGATAGCGCTATCCGTT |
|
Pnap_0046 |
gntK |
-140 |
6.5 |
ATAGGATAGCGCTATCCCAA |
|
Pnap_0046 |
gntK |
-30 |
6.1 |
AACGGATAGCGCTATCCAAG |
|
Rhodoferax ferrireducens DSM 15236
|
|
Rfer_0956 |
gntK |
-33 |
6.1 |
TTAAGATAGCGCTATCTATT |
|
Rfer_0957 |
gntR |
-197 |
6.1 |
AATAGATAGCGCTATCTTAA |
|
Variovorax paradoxus S110
|
|
Vapar_6142 |
gntT |
-66 |
5.8 |
GCGGGATAGCGCTATCCCTG |
|
Vapar_6142 |
gntT |
-141 |
6.1 |
CTAGGATAGCGCTGTCCCAG |
|
Vapar_6141 |
gntR |
-70 |
6.1 |
CTGGGACAGCGCTATCCTAG |
|
Vapar_6141 |
gntR |
-54 |
5.7 |
CTAGGACAGCGCTGTCCAAT |
|
Vapar_6141 |
gntR |
-145 |
5.8 |
CAGGGATAGCGCTATCCCGC |
|
Vapar_6142 |
gntT |
-157 |
5.7 |
ATTGGACAGCGCTGTCCTAG |
|
Leptothrix cholodnii SP-6
|
|
Lcho_0327 |
gntK |
-128 |
6.6 |
CTAGGATAGCGCTATCCAAA |
|
Lcho_0327 |
gntK |
-19 |
6 |
ACGAGATAGCGCTATCCAAA |
|
Lcho_0328 |
gntR |
-170 |
6 |
TTTGGATAGCGCTATCTCGT |
|
Lcho_0328 |
gntR |
-61 |
6.6 |
TTTGGATAGCGCTATCCTAG |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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