Profile of regulator GntR in Pseudomonadaceae
Properties
| Regulator family: |
LacI |
| Regulation mode: |
repressor |
| Biological process: |
Gluconate utilization |
| Effector: |
Gluconate |
| Regulog: |
GntR - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA2321 |
gntK |
-34 |
6 |
CAAAGATAGCGCTGTCTCAC |
|
PA2321 |
gntK |
-162 |
5.9 |
CTAAGGTAGCGCTGTCTCGC |
|
PA2320 |
gntR |
-52 |
5.9 |
GCGAGACAGCGCTACCTTAG |
|
PA2322 |
gntT |
-78 |
5.5 |
CAAAGATAGCGCTACCCCGA |
|
PA2320 |
gntR |
-180 |
6 |
GTGAGACAGCGCTATCTTTG |
|
Pseudomonas entomophila L48
|
|
PSEEN2421 |
gntK |
-166 |
6 |
CTAAGGTAGCGCTGTCTCAG |
|
PSEEN2421 |
gntK |
-36 |
6 |
CCAAGACAGCGCTATCTCAC |
|
PSEEN2422 |
gntR |
-192 |
6 |
GTGAGATAGCGCTGTCTTGG |
|
PSEEN2422 |
gntR |
-62 |
6 |
CTGAGACAGCGCTACCTTAG |
|
PSEEN2420 |
gntT |
-82 |
6 |
CAAAGACAGCGCTGTCTTAA |
|
Pseudomonas putida KT2440
|
|
PP3415 |
gntR |
-191 |
5.9 |
GTGAGATAGCGCTGTCTCGC |
|
PP3415 |
gntR |
-62 |
6 |
CTGAGACAGCGCTACCTTAG |
|
PP3416 |
gntK |
-164 |
6 |
CTAAGGTAGCGCTGTCTCAG |
|
PP3416 |
gntK |
-35 |
5.9 |
GCGAGACAGCGCTATCTCAC |
|
PP3417 |
gntT |
-88 |
5.5 |
CAAAGACAGCGCTACCCCAA |
|
Pseudomonas syringae pv. tomato str. DC3000
|
|
PSPTO3564 |
gntK |
-238 |
5.7 |
ATAAGGTAGCGCTGTCTCAT |
|
PSPTO3564 |
gntK |
-74 |
5.8 |
CAAAGACAGCGCTGTCTCCA |
|
PSPTO3565 |
gntT |
-82 |
5.9 |
AAAAGACAGCGCTGTCTTGC |
|
PSPTO3563 |
gntR |
-229 |
5.8 |
TGGAGACAGCGCTGTCTTTG |
|
PSPTO3563 |
gntR |
-65 |
5.7 |
ATGAGACAGCGCTACCTTAT |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_4580 |
gntK |
-185 |
5.6 |
CTAAGGTAGCGCTGTCCTGA |
|
PFL_4580 |
gntK |
-34 |
5.5 |
CGAAGGTAGCGCTGTCTGCG |
|
PFL_4581 |
gntR |
-201 |
5.5 |
CGCAGACAGCGCTACCTTCG |
|
PFL_4581 |
gntR |
-50 |
5.6 |
TCAGGACAGCGCTACCTTAG |
|
PFL_4579 |
gntT |
-72 |
5.5 |
AAAAGGTAGCGCTATCCCAC |
|
Pseudomonas mendocina ymp
|
|
Pmen_2569 |
gntKZ |
-67 |
4.5 |
TTTGGATAGCGCTAACATCC |
|
Pseudomonas stutzeri A1501
|
|
PST_2201 |
gntKZ |
-104 |
4.5 |
GTTTGATAGCGCTAACATCC |
|
Azotobacter vinelandii AvOP
|
|
Avin_27300 |
gntR |
-167 |
5.5 |
CGAGGACAGCGCTATCCTGT |
|
Avin_27310 |
gntK |
-177 |
5.5 |
ACAGGATAGCGCTGTCCTCG |
|
Avin_22480 |
gntK |
-30 |
5.5 |
AAAAGATAGCGCTATCTACC |
|
Avin_22480 |
gntK |
-176 |
5.9 |
ATAAGATAGCGCTGTCTTTA |
|
Avin_22470 |
gntT |
-57 |
5.9 |
GAAAGATAGCGCTGTCTCGC |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
