Profile of regulator TPP in Streptomycetaceae
Properties
| Regulator family: |
RF00059 |
| Regulation mode: |
|
| Biological process: |
Thiamine biosynthesis |
| Effector: |
Thiamine pyrophosphate |
| Regulog: |
TPP - Streptomycetaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Streptomyces griseus subsp. griseus NBRC 13350
|
|
SGR_5394 |
thiO |
-111 |
54.5 |
GTAGAACACTCGCGGGAGCCCGGACGCACCGGGCTGAGAGGGAGGCTGGACGGCCTCCGACCGTACGAACCTGCTCCGGGTCATGCCGGCGAAGGGAGGGGCTGGACACTCATG |
|
SGR_1857 |
thiB |
-121 |
49.1 |
CATATTCCGACAGGGGAGCGCCACAGCGCTGAGAGTGCGGCACCGAGGACAGGTTGGCCGCAGACCCTCTGAACCTCGCCCGGGTCATTCCGGGTAGGAAGTTCGGACCTTACTCAAG |
|
SGR_3653 |
thiC |
-127 |
42 |
CCTTTGCACACGCGGGAGCTCGGAGCACCGGGCTGAGAGGGCGCTGATCGCCGTACATCCGTACGGGACACGCTGCGCCGACCGCCGAACCTGTTACCGGGTAATGCCGGCGTAGGGAGTAGGTCTCATGACCAC |
|
Streptomyces scabiei 87.22
|
|
SCAB_67741 |
thiO |
-110 |
53.1 |
GTAGAGCACTCGCGGGAGCCCGGACGCACCGGGCTGAGAGGGAGGCTGGCGGCCTCCGACCGTACGAACCTGATCCGGGTCATGCCGGCGAAGGGAGGGGCTGGACGCCCATG |
|
SCAB_25941 |
thiB |
-188 |
49.2 |
CATATTCCGACAGGGGAGCGCCACAGCGCTGAGAGTGCGGCAAGCGGGCCGCAGACCCTCTGAACCTCGCCCAGGTCATTCTGGGTAGGAAGTTCGGTCTTCACTCGAG |
|
SCAB_46341 |
thiC |
-148 |
39.4 |
TTTGCACACGCGGGAGCTCGGAGCACCGGGCTGAGAGGGCGTTGACCTCCGCAGACGCGATGTTTCACGTGGAACATCGCCGGGCGGAAATCGCTGCGTCGACCGCTGAACCTGTTACCGGGTAATGCCGGCGTAGGGAGTAGGTCTCATGACCATCG |
|
Streptomyces avermitilis MA-4680
|
|
SAV_6095 |
thiO |
-112 |
54.3 |
GTAAAGCACTCGCGGGAGCCCGGACGCACCGGGCTGAGAGGGAGGCTGGGACGGCCTCCGACCGTACGAACCTGATCCGGGTCATGCCGGCGAAGGGAGGGGCTGGACGCCCATG |
|
SAV_2620 |
thiB |
-187 |
51.4 |
CATATTCCGACAGGGGAGCGCCACAGCGCTGAGAGTGCGGGAGAGTCCGCAGACCCTCTGAACCTCGCCCAGGTCATTCTGGGTAGGAAGTTCGGTCATCACTCAAG |
|
SAV_7206 |
cytX |
-87 |
65.9 |
CGTACCGGACACGGGGTGCCCCATCCGAGGGCTGAGATCACACCCGTCGAACCTGAACCAGTTCGTACTGGCGGAGGGATGTCTTCCATGCCTTTG |
|
SAV_4265 |
thiC |
-150 |
39.9 |
CCTTTGCACACGCGGGAGCTCGGAGCACCGGGCTGAGAGGGCGCTGACCTCCGCATCCGCGATGTTTCACGTGGAACATCGTCGGGCGGACATTGCTGCGTCGACCGCTGAACCTGTTACCGGGTAATGCCGGCGTAGGGAGTAGGTCTCATGACCAA |
|
Streptomyces coelicolor A3(2)
|
|
SCO2107 |
thiO |
-108 |
50.4 |
AAGGCACTCGCGGGAGCCCGGACGCACCGGGCTGAGAGGGAGGCTGGCGGCCTCCGACCGTACGAACCTGATCCGGGTCATGCCGGCGAAGGGAGGGGCTGGACGCCCATGTC |
|
SCO5646 |
thiB |
-184 |
51.2 |
TATTCCGACAGGGGAGCGCCACAGCGCTGAGAGTGCGGCACCGGCCGCAGACCCTCCGAACCTGGCCCAGGTCATTCTGGGTAGGGAGATCGGTCACCACTCGAGCT |
|
SCO3928 |
thiC |
-54 |
22.8 |
TGCGTCGACCGCCGAACCTGTTACCGGGTAATGCCGGCGTAGGGAGTAGGTCTCATGACCATCA |
Export
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Regulatory Sites
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[ FASTA format ]
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