Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator TPP in Rhodospirillales

Properties
Regulator family: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Rhodospirillales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Rhodospirillum rubrum ATCC 11170
Rru_A2008 thiC -205 56.4 ACCTGTTCCAGGGGGGCCCCGGCAAGGGGCTGAGATACCGATGGCTGAAGGGGGCTTTCCCCGAGGGCGCGCGGTGACCCTTCGAACCTGATCCGGGTCATGCCGGCGAAGGGACGGAACGCGGGCCGGCGCAC
Magnetospirillum magnetotacticum MS-1
Magn03010971 thiC -169 75.2 CATCTTTCCGAAGGGGAGCCCCGATCGAGGGGCTGAGAGGCCGGTCATCAGAGCCGGCGACCCTTGGAACCTGATCCGGGTCATTCCGGCGAAGGGATCGGAACCAATCGGTGC
Magn03003992 thiO -201 58.3 GACGTTCCAGGGAGATCCCCGTCAAGGGGCTGAGACACCGCTATCGCCGTCACCGGCAGCGCGGAAATCCTTCGAACCTGATCCGGCTCATACCGGCGTAGGGATTGGACCTGATGGATCGCTT
Magnetospirillum magneticum AMB-1
amb0221 thiC -63 73.8 CATCTTTCCGAAGGGGAGCCCCGTTCAAGGGGCTGAGAGGCCGGTCACAGGCGCCGGCGACCCTTGGAACCTGATCCGGGTCATTCCGGCGAAGGGATCGGAACCCATCGGTGC
Azospirillum sp. B510
AZL_004520 thiO -90 50.9 TCATAGGCCTGGGGTGCCGCGCGGTGGTCGCGCGGCTGAGAACACACCCATCGAACCTGTCTGGGTAATTCCAGCGAAGGGAGCCGCCGCATGATCCATGC
AZL_005290 thiC -260 54.3 TCCAGGGGGGTCCCGACAGGGGGCTGAGATACCAACGGCCAAACGGCGCGAAGCGCCATCGGCAGCGTGGTGACCCTTTGAACCTGATCCGGGTCATACCGGCGAAGGGAGGGACC
AZL_014930 thiZ -147 64 CCTTCACTGGGGGGAGCCGATGGGCGGCTGAGAGGTCCCGTTGCGGGACGACCCCTGGAACCTGATCCGGTTCATGCCGGCGTAGGGATCAGTGATGCGGACCCGCAG
Rhodospirillum centenum SW
RC1_3970 thiC -194 51.5 CTGGTTTCCAGGGGTGCCCCGGCAGGGGCTGAGACACCGCAGGCCGGCCGCCAGGGGCGGACAGGCGCGCGGGAACCCTTAGAACCTGATCCGGGTCGTACCGGCGTAGGGATGGAACCGGCGGATGCCCTG
RC1_3102 thiO -106 53.1 GTCGTCAAACCCGGGGGTGCCGGGGAGATCCGCCCCCGGCTGAGATCACACCCGTCGAACCTGATCCGGGTCATGCCGGCGAAGGGAGGTCACCATCAGCACCG
Gluconacetobacter diazotrophicus PAl 5
Gdia_1390 thiC -177 66.3 GTCGCGTTCTCCGGGGAGCCGCGTCAGAATGGCTGAGAGAGGGGCTAGCCCCTGACCCGTCGAACCTGATCCGGGTCATGCCGGCGAAGGGATGGGAATTGAGCGCGATG
Acetobacter pasteurianus IFO 3283-01
APA01_13250 thiD -150 70 GCCTTACCGAGGGGAGCCCCGACATGGGGCTGAGATATTGCAGAGCCAACAGGCAGCGTAATGACCCTTTGAACCTGATCCGGGTTATGCCGGCGAAGGGACAGGTTTGACTACCCTATCC
APA01_25230 thiC -183 34.6 TCGTTCGGGCACCGTGGCGACCCTGCCGCCAGAACATGATGTTTTGGTGGGGAACCTGATCCGGCTTATACCGGCGGAGGGACTGGTGCCTGAAAAGACAG
Gluconobacter oxydans 621H
GOX2225 thiC -269 54.4 CGGCTCGTCAGGGGGGTCCCGCCTTAAGGGACTGAGAGGCTGATTGGTGTTGTCGGGAAACCGGCTGCACGGTGAAGCGACCCTTTGAACCTGACCCAGTTGATACTGGCGTAGGAAGACCGAAGGGCTCTCATTT
GOX1347 omp_thi -223 63.1 ACGCTTCACCGTGGGGGGCTCCGGCATGGGGCTGAGATTCTGCTGGTGTGACCCTTAAAAGTCATGCGGTGCAGTGACCCATTGAACCTGATCCAGTTCATACTGGCGGAGGGATGGTGGTCGCTGTCTGC
Granulibacter bethesdensis CGDNIH1
GbCGDNIH1_0108 thiC -197 51.3 CAGCATCCGAGGGGGGCCCTGGCAGAGGGCTGAGATACCGTCAGGCCGCCATTATGGCAGGCGCATGGTGACCCTGACACCTGATCCGGTTAGCACCGGCGTAGGGACGGGATCGCGCCGAAAACG
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