Profile of regulator NrdR in Planctomycetes
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Regulog: | NrdR - Planctomycetes |
Member of regulog collections
- By trascription factor - NrdR
- By taxonomy - Planctomycetes
- By TF family - NrdR
- By effector - Deoxyribonucleotides
- By pathway - Deoxyribonucleotide biosynthesis
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Blastopirellula marina DSM 3645 | |||||
| DSM3645_25172 | nrdA | -374 | 4.5 | CCACGATATATTGGGC | |
| DSM3645_25172 | nrdA | -298 | 4.8 | CCACAGTATCTTGTGC | |
| DSM3645_25172 | nrdA | -266 | 4.7 | GCACAATATGCTGTGG | |
| DSM3645_08982 | nrdJ | -28 | 3.5 | GCACCATATATTGACA | |
| DSM3645_08982 | nrdJ | -60 | 5 | GCACCATATATTGTGT | |
| Pirellula sp. 1 | |||||
| RB12762 | nrdJ | -263 | 4.5 | CGCCCACATGTAGTGC | |
| RB12762 | nrdJ | -231 | 4.3 | CCACTACCGGTAGTGA | |
| Pirellula staleyi DSM 6068 | |||||
| Psta_1278 | nrdA | -309 | 3.8 | ACCCAATTAGTTGTGC | |
| Psta_1278 | nrdA | -341 | 3.4 | TGACAATCCCTGGGGG | |
| Psta_0580 | nrdJ | -443 | 4.9 | GCACAACCTGTTGTGC | |
| Psta_0580 | nrdJ | -410 | 3.7 | TCACAACTGGTTGATT | |
| Psta_0580 | nrdJ | -218 | 5 | CCACAATAGATGGTGT | |
| Psta_0580 | nrdJ | -102 | 4.1 | TCCCAACACGTTGGTT | |
| Planctomyces maris DSM 8797 | |||||
| PM8797T_04865 | nrdA | -126 | 4.5 | TCACTATTTGTGGGGC | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |