Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator TPP in Vibrionales

Properties
Regulator family: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Vibrionales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Vibrio cholerae O1 biovar eltor str. N16961
VC2539 thiB -128 31 TGCGATGTTCGCGGTTGAACCTGAACCAGATAATGCTGGCGTAGGAATTGAGCTAGGTTTGCAGA
VC0061 thiC -198 76.2 TCCACTTGTCGGAGTGCCATTGGGCTGAGACCGTTTATTCGGGATCCGTTGAACCTGATCAGGTTAATACCTGCGAAGGGAACAAGAGAAGACTCTCTTA
VC1296 thiD -307 54.4 TCCTGTAGTCGGGGAGCCTGAGAGCGTATATACCCTTCTTACTTGAAGCTGCAGCGGTGTTGGCTACGTTCGTTCACCCCAATCACATAGTTTATCTATGCTCATGGGGATGAACTCACTTGTCGCCTACCTGCAACTCCAAGTAGTTTGGGTATAACAACGTGCGAATTAAAGGCTGAGATCGCGTAGCGAGACCCGTTGAACCTGATTCAGTTAGGACTGACGTAGGGAACTATCCTCAACCGCTGGT
Vibrio vulnificus CMCP6
VV1_0964 thiC -246 75.5 GTTTCACTTGTCGGAGTGCCTTAGGGCTGAGACCGTTTATTCGGGATCCGTTGAACCTGATCAGGTTAGAACCTGCGAAGGGAACAAGAGAAGATACTTG
VV21433 thiD -188 77.5 GCCAACATAGTCGGGGAGCCTTATCGGCTGAGATCGCCACGCGAGACCCGTTGAACCTGATTCAGTTAATACTGACGTAGGGAACTATTACGCGCATATA
VV1_0703 thiB -193 62.9 GAACCACTCATCGGGGCGCTTAACTGTGGTGTTTTATTGCATCGCAGTGGCTGAGACTAGGCAAAGGCCTAGGACCCGTAAACCTGAACCAGATAATGCTGGCGTAGGAATTGAGTCGGGATTAATT
Vibrio harveyi ATCC BAA-1116
VIBHAR_00366 thiC -265 69.7 ATTTCACTTGTCGGAGTGCCATAAGGCTGAGACCGTTAATTCGGGATCCGTTGAACCTGATCAGATTAGAATCTGCGAAGGGAACAAGAGAAGATATCTA
VIBHAR_00788 thiB -217 49.1 CCAACTCATCGGGGAGCAAACCCACTTGGCATTGAGCTTATCAATACCATTGGGCGCTGAGACCTAATCGCTTAACGTTGTTGAGCAAACAGGGACCCGTATTACCTGAACCAGATAATGCTGGCGTAGGAATTGAGTCTGGATATTGGAA
VIBHAR_06838 thiD -218 71.9 CGAAATAGTCGGGGGGCCCTTGCAGTTTATGCATCGGCTGAGATCGAAATTCGAGACCCGTTGAACCTGATTCAGTTAGCACTGACGTAGGGAACTATCATCACTTTGCCAC
Vibrio parahaemolyticus RIMD 2210633
VP3027 thiC -268 73.9 GCTTCACTTGTCGGAGTGCCATAAGGCTGAGACCGTTAATTCGGGATCCGTTGAACCTGATCAGATTAATATCTGCGAAGGGAACAAGAGAAGATACCTA
VPA0136 thiD -205 71.5 AGCGAAATAGTCGGGGGGCCACGTGATAAGCGTTGGCTGAGATCGAAATTCGAGACCCGTTGAACCTGATTCAGTTAGCACTGACGTAGGGAACTATGCGCGCTTTGCC
VP0316 thiB -208 54.7 CCAACTCATCGGGGAGCAAACCCATTTTGCATTGAGTCAATCAATGCATTTGGGCGCTGAGACCTAAGTGTTTTACTAGGGACCCGTATTACCTGAACCAGATAATGCTGGCGTAGGAATTGAGTCTGGATATTGGAA
Vibrio shilonii AK1
VSAK1_24309 thiC -217 78 TCAATACTTGTCGGAGTGCCTTAGGGCTGAGACCGTTAATTCGGGATCCGTTGAACCTGATCTGGTTAGTACCAGCGAAGGGAACAGGAGAAATAAAATG
VSAK1_11975 thiD -171 71.3 CTCATTAGTCGGGGAGCGTTTTCGCTGAGATCACCAAAGTGGTGAGACCCGTTGAACCTGATTCAGTTAGCACTGGCGTAGGGAACTGATAGACACCGCACTA
VSAK1_01889 thiB -160 68.3 TGTGACTCACGGGGTGCACTAGCAGTGGTGCTGAGAGAAGGTAATACCTGACACCCGTATACCTGATCCAGATAATGCTGGCGTAGGGATGAGAACTCCGTTCTATGG
Vibrio splendidus LGP32
VS_3098 thiC -229 80.3 ATCGAACTTGTCGGAGTGCCATATGGCTGAGACCGTTAACTCGGGATCCGTTGAACCTGATCAGGCTAATACCTGCGAAGGGAACAAGAGTAGATATCTA
VS_2767 thiB -174 57.9 TGAACACTCATCGGGGAGCGAACCATTCAAATAATGAATGCGAGCTGAGATCAAGCAGACACTTGGGACCCGTAAACCTGAACCAGATAATGCTGGCGTAGGAATTGAGTTAGGAACAACC
VS_II1090 thiD -209 68.9 CTATCAATAGTCGGGGGGCATATACCTTATTTGGTGTTTGCTGAGATCGTTAGTCGAGACCCGTTGAACCTGATTCAGTTAACACTGGCGTAGGGAACTATAAGCACTCGATC
Vibrio fischeri ES114
VF_A0316 thiD -199 73 GCCATTAGTCGGGGAGCCAATAGGCTGAGATCGCAATAGCGAACCCGTTGAACCTGATTCAGTTAGTACTGACGTAGGGAACTAATGGTCCTTTTGACA
VF_0267 thiB -165 60.6 ACTTCTCATCGGGGAGCTTTGGCTGAGATTAATGAAGATTGGATAATGTTCATTTAAACCCGTATCACCTGAACCAGATAATGCTGGCGTAGGAATTGAGATGACATTCTCCTA
VF_0032 thiC -301 77.8 GAAACTTGTCGGAGTGCTTAGTGCTTTTTAAAGTACGAGCTGAGACCGCAGTGCGGGATCCGTAGAACCTGATCAGGCTAATACCTGCGAAGGGAACAAGAGACAATTTACATC
Vibrio salmonicida LFI1238
VSAL_II0486 thiD -197 72.9 GGCATTAGTCGGGGAGCCAATAGGCTGAGATCGCAATAGCGAACCCGTTGAACCTGATTCAGTTAGTACTGACGTAGGGAACTAATGGTCTTCTTGAAA
VSAL_I0349 thiB -164 59.4 GCCTCTCATCGGGGAGCGACTAGCTGAGATTAGTAAACATTGGATAATGGTTACTTAAACCCGTACTACCTGAATCAGATAATGCTGACGTAGGGATTGAGATGACATTCTCATC
VSAL_I2983 thiC -271 77.7 GAAACTTGTCGGAGTGCTTAGTACTTTTTTAAAGTACGAGCTGAGACCGCGTTGCGGGATCCGTAGAACCTGATCAGGCTAATACCTGCGAAGGGAACAAGAGATAATTTATCAC
Vibrio angustum S14
VAS14_01541 thiD -201 67.3 TGAGAGTTAGTCGGGGGGCATTACGCTGAGATCACAATTAAGTGGGACCCGTTGAACCTGAACCAGTTAGCACTGGCGGAGGGAACTAAATAAACAATATC
VAS14_08195 thiB -217 71.3 TGTTCTCATTGGGGAGCCATTTGGCTGAGATTGTTAGGCATACGTGCTTTATAGCAGGACCCATTGAACCTGAACCAGGTAATGCTGGCGTAGGAATTGAGATGCTCGAACATTC
VAS14_22704 thiC -215 79.5 GCTACTTGTCGGAGTGCCATATGGCTGAGACCGCATTGCGGGATCCGTTGAACCTGATCAGGCTAATACCTGCGAAGGGAACGAGAGAATGTCTTCTGC
Photobacterium profundum SS9
PBPRA0413 thiB -289 64 ACCGTTCTCATTGGGGAGCCCGTATTTATACAGATGCACGTAGCAACTAGAGTACAGGCTGAGATTGCATCGCAGAACCCACAGAACCTGAACCAGGTCATGCTGGCGTAGGAATTGAGAAAAGAAGGTCG
PBPRA0106 thiC -234 81.8 GAAACTTGTCGGAGTGCCACATGGCTGAGACCGTATTACGGGATCCGTTGAACCTGATCAGGCTAATACCTGCGAAGGGAACAAGAGAAAATCTTCTGC
PBPRB0688 thiD -177 71.4 AGCTTGTTAGTCGGGGAGCCTTTGGCTGAGACCACTTCGGTGGGACCCGTTGAACCTGATCCAATTAACATTGGCGGAGGGAACTAATAGTAATGCCCT
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