Profile of regulator Cobalamin in Deinococcus-Thermus
Properties
| Regulator family: |
RF00174 |
| Regulation mode: |
|
| Biological process: |
Cobalamin biosynthesis |
| Effector: |
Adenosylcobalamin |
| Regulog: |
Cobalamin - Deinococcus-Thermus |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Deinococcus radiodurans R1
|
|
DRB0007 |
btuF |
-100 |
13.8 |
GGGGAAGCCCGGTGACGGTGCGGCCTGGCTTTTTCCAGTCCCGCACCCATTCCGGCACTGTCGCGCAGCGGTGAATCGGCCTTAAGGGCCGTCAGTCCGAATGCCTCT |
|
DR2588 |
btuF |
-84 |
17.6 |
GGGAAAGTCCGGTTTCAGTCCGGCACTGTCGCGCAACGGTTTTCAGTCCGAACACCTCG |
|
Deinococcus geothermalis DSM 11300
|
|
Dgeo_0025 |
btuF |
-244 |
21.6 |
GGGAAAGACCGGTGAGAATCCGGCACTGTCGCGCAACGGTCACTGCCCCCTCTGTCCACCCCCAAGACAAGGGGCGGGAAGTCCGAACACC |
|
Dgeo_2363 |
btuF |
-259 |
35 |
CCGGCTTCTGCTATCCTGGCGCCACCTGGGAGCGGGGAAGTCCGGTGAGAATCCGGCGCTGTCGCGCAACGGTAAGCAGGCCTGCAGTCCTGTCAAGCCCGAATGCCCCCCAGGGACGCCCTGCGCTGCAG |
|
Deinococcus deserti VCD115
|
|
Deide_02140 |
btuF |
-274 |
25.5 |
GGAAGCAGGTGAAGACCCCTGCCGGGGGTCCATTCCTGCACTGTCGCGCAACGGTAAACGCTGGCCCTTTGAGGCCGGCGCAAAGTCCGAACACCGG |
|
Deide_2p01550 |
btuF |
-242 |
41.2 |
GGAAGTCCGGTGAGATTCCGGCGCTGTCGCGCAACGGTATGCAGGCCCTGACCTGCGAGCCCGAATACCAC |
|
Thermus thermophilus HB27
|
|
TTP0007 |
hoxN |
-209 |
45.9 |
AGGGGGAAGACCGGTGAAAGTCCGGCGCTGTGCCGCAACGGTAACCGGCCCTAAGCCACAGGCCTAGCGTCTTGGCCGGAAGCCCGGATACCCGC |
|
TTC0390 |
btuF |
-291 |
60.5 |
CCAGGTCCCGTAGCCCTGGTGCCTGGGCGCGTAGTCCAGGCTTAAAGTGGGGAAGTCCGGTGCAAGTCCGGCGCTGTCCCGCAACGGTAACCGGTCACGCGTCAGGCCCTTCGTCGCAGGCCGGAAGCCCGAATACCTGCCAGGGCCGTCCGCCCTTCCCC |
|
TTP0160 |
achX |
-240 |
35.6 |
GGAAGTCCGGTGAAAGTCCGGCGCTGTCCCGCAACGGTAACCGGCCCAAGCGTCGCGCCCTCCGCCCTGGCCGGAAGCCCGAGTACCCG |
|
Thermus aquaticus Y51MC23
|
|
TaqDRAFT_5534 |
btuF |
-291 |
55.7 |
CAGGTCCCGTTTGCCCTGGTGCCTGGGCGCGTAGTCCAGGCTTAAAGTGGGGAAGTCCGGTGCAAGTCCGGCGCTGTCCCGCAACGGTAACCGGTCCCGCTTCGTGCCCTTCAACGCAGACCGGAAGCCCGAATGCCTGCCAGGGCCGCCCGCCTTTCCCC |
|
TaqDRAFT_5285 |
hoxN |
-204 |
42.1 |
AAAGGGGGAAGACCGGTGAGAGTCCGGCGCTGTGCCGCAACGGTAACCGGCCCAACCCATAGGCCCATCGTCTAGGCCGGAAGCCCGAATACCC |
|
TaqDRAFT_3194 |
achX |
-260 |
37.4 |
GGAAGTCCGGTGCAAGTCCGGCGCTGTCCCGCAACGGTAACCGGCCGCTTTGGGGCCCCTGGCCCAAAGGAACCCCAGGCCGGAAGCCCGAGTACCCA |
Export
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Regulatory Sites
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[ FASTA format ]
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