Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator T-box(Tyr) in Clostridiaceae

Properties
Regulator family: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Tyr-tRNA
Regulog: T-box(Tyr) - Clostridiaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Clostridium cellulolyticum H10
Ccel_2081 tyrS -275 88.6 TCAAACAGCTATGATTAATTACAGTAACTTTCTGCAATGTATTTTTAGAGAACAGTCTGGTCGGTGAAAAGGCTGGAATACGCAGATGAGTGAATTACAGATTATGAGCCGCTATTTGCCGGGTATGCCCGTTACAGCTTTAATAAGACATTTTTGACTAAGGTGCTCAAAAATGTGAATTAAGGTGGTACCACGAAGCTCTTCGTCCTTATA
Ccel_2071 aroA -351 103.6 TAAATGTGATGAATGGGAAAAGTAGACAATATGAGTCTTTAAAGCGAGCAGTGAACTGGTGGAAGCATTGCAGGATAGTATTTTTGAAGTTCTCCCATGAACAGTTGGCTGAACCTTTTATGTAGGTCATACCGGGTCTTTCCCGTTACAGGAAGAAGTGTATCGGATTTTTATTTAGTTTCCCGTACATGATTAAGTGGGTTTTTACCAATTTGGGTGGTACCGCGTAGGCTATAAGTCTTCGTCCCTTGTTT
Clostridium phytofermentans ISDg
null tyrZ -425 108 CATAGGCTATGATAAGAAAGAGTAAAAATCATTGTAATCTAACAGAAAGTTGCCGGTAGATGAGAGGCGCAAGAGAGCAGATTTTGAATACATCTTTGAGCTTCACACCGAACGACTATAATAGTTTAAGTAGGCTGTTGACGGTATCCTGCACCCGTTATCGTGCTAGAGTATAACCATCGGTAAGGATGAGTACTCGAAGAGATTAGCTGTGCGAACAGTTAATAAAATTGAGGTGGTAACGCGTGATAATATCCCGCCCTCTGAAG
Clostridium acetobutylicum ATCC 824
CAC0780 tyrZ -324 105.9 TAAATGCATTGAAGAGAAAGAGTAGGATTACCTAGAGCTTTTACAGAGAGCTTCCGTTAGCTGAGAGGAAGCAAGAATAAGTATTCTGAATACATCTCTGAGCACCTCACCAAAGCTTTCAAACTAGAAGGTGGTAGGCTGAAGGCGTATTCCTTTCCAACGTTAAAAGGATAGAGTATCATGTATGAATTCTATACATCGTACTTGAAAAGGTTAGTATTGTGAGATGCTAATAAATTAAGGTGGTACCGCGAATGTAACTCTCGTCCTTATTAA
Clostridium novyi NT
NT01CX_1364 tyrS -279 116.2 GAAAGATTTTGATGGAAAGAAGTAGCTTTATGATTCATGAAGAGAGCTAGTGGTTGGTGTGAACTAGTTGATGAGTTTAGTGAAATACATTCTTGAATTTTATACTGAACGGTTTAAACTTAGTAGGTTGATACGGATATCCCAACGTTATAGGGAAATGAGCGAATATGTATAAACATATTAACTTGGGTGGTACCACGGAAAAATTTCGTCCCTTTATA
Clostridium difficile 630
CD1521 tyrZ -324 115.3 TAAATGCTATGAAGAGAAGAAGTAGGGCTAGATTTTATTTAACAGAGAGTTCCAGTTTGGTGAAATGGAATAAATTGATTTAGTTTGAATACATCTCAGAGCACTATCTCTGAAAGATAACAACCATTAAGAGATATCGGATTAGTACACGTTATAGTACACGAGTATATGTAATTGTACTCTAAGAGATTAATATCGTGAGATATTGATGAACTAAGGTGGTAACACGTAAGCAATGCTTTCGTCCTTTTAAG
Clostridium beijerincki NCIMB 8052
Cbei_2416 tyrZ -353 100 TAAAAGCAATGAAAAGAATAAGTAGAAATTAGTGATGCCATACAGAAAGTTACCGGTTGATGAGAGGTGCATGGAAGCTGGTTTTGAATACATCTTAGAGCTTCAAGCTGAAAAAAGTTTCTTTTGAGTAGGTGATGACGGAACCCTGCACCCGTTATAGTGCTAAAGTATAACCAAAATTTTGGCGTACTTGAAGAGGTTAATCGTGTGAGCGATTAATGAATTAAGGTGGTAACACGGGAGTTATACTCTTGTCCTTTATAT
Clostridium sp. OhILAs
Clos_0921 tyrS -249 114 GCTAAAAACTTTGAAAGAAATCAGTAGTCCCCATGGTTACAATTTTAGAGAGTAGATCGGTTGGTGAAAGATCTATAGCACATGGTAAGATGAATTACATTCTGGAGTTGCAAGGTCAAAAGCTTTGCCGGTTTTCACCCGTTATCGTGTTTTGAGGCATCGATTCGATGTAAATTAAGGTGGTACCACGAGTTATCTCGTCCTTTTG
Clostridium scindens ATCC 35704
CLOSCI_01439 tyrS -386 89.6 AAAAGGCTATGAAAAGAAGAAGTAGTAATCGTTACACCCATACAGAAAGCTGCCGGCAGATGAGAGGCGCATGAAGGAAGGGATTATGAATACATCTTGGAGCCGCGTACCGAAAGCGTTCCCTTACAGAAAGACGCAGGGAAGGATCAGTAGGCTGCGACGCAAGGCATACGTTACATGCATAAGCTGCGGCACGCGTAAGTTAGGGCACATATAATTTGTTGCGCGCAGGCTTAATAAGACTGGTGATGCGAGTTGCCGGTGAACAAAGGTGGTACCACGGAACTATCCGTCCTTATCTA
Clostridium nexile DSM 1787
CLONEX_01102 tyrS -352 107.5 AAACGGCGAAGAAAAGAAAAAGTAATAATTGAGACGCCATACAGAAAGCTGCCGGTTGATGAGAGGCGCATGGAAAGTCGATTATGAATACATCTTGGAGCTTTGCACCGAACAGTGACATAATTCTAAGTAGGCTGCAACGGGATGGCACACGTTATCGTGCCTGAGTATTGATAGATACTTGCAGAGGCGTTTGCTGTGAAGTGAATGCGAATGAAGGTGGTACCGCGGGATTACACTCGCCCTTTATGT
Clostridium leptum DSM 753
CLOLEP_03157 tyrS -296 129.5 CATATCGGCTGTGAAAAGAAGGAGTAAAAAAGCTTTATCTTGCGAAGAGACCCGCCGGGTGGTGTAAGGCGGGGAAGAAGGCTTTTTGAAATACATCTTGGAGCCGCGGAGCTGAATTTTTAAGTAGGCTTCGCCGTATTTGCGCACGTTACAGCGCCAGGGTATTATCGTACCCGTGAGGCCATGGCTGTGAGGCTGTGGTGAATTGAGGTGGTACCGCGGATTTTCCGCCCTCTGC
Clostridium hiranonis DSM 13275
CLOHIR_01268 tyrZ -206 107.7 CAAAGGCTGAGAAGAAAAGAGTAGGATTTATGGGATTTTCAGAGAGCTCCAGGTTGGTGTGATGGAGTAATTTTGTATATCTGAAGTACATTTTGGAGCCGCTTTCCTGAAATAATAGTAGGGTTTGACGATTTGCATACGTTATAATGCAGTGTCTAGTATTTTGACACACTGAGTCGGATATCGTGAGGTATTCGAGAACTAAGGTGGTAACACGAGAGATATCTCCCGTCCTTTTTAT
Clostridium bolteae ATCC BAA-613
CLOBOL_06297 tyrS -284 117.8 AAAGAATGCCATGAAGGAGAACAGTAGTACAGAGGCTTTTCTTACAGAGAGCGCCCGGTTGGTGGAAGGACGCAGGAAAGACTGTATGAATACGCTCCGGAGCAGCAGCCTGAAGGTTTTAGTAGGGTTTGACGGGAACGCCCGATACAGCGTGAGAGTGTTGACAGACACTCGATGAGGAATGTTCTGTGAAGGACATTCAAGTACAGAGGTGGTACCGCATAACCTGCCCTCTGC
CLOBOL_03268 tyrS -448 70.2 TGAATTGGCTATGACGGGAACAAGTAGTAGCCTGCAGGAACAGACAGAAAGCAGCCGGATGATGAGAGGCGCATGGAAAGCAGGTCATGAATACATCCCTGAGCTTCGCACCCAACAGCGCTGCTTCATATAACAGCCTTAGTAGGCTGCGACGGGTCCTGCATCCGTTATCGTGCTAGAGTATACGGGCGTTTGGCCAGAGCCTGGCGCCAGTACTCGAAGAGGCAGGCAGCGTGAGCTGTCTGTGAACATCAGGTGGTAACACGGGGCTTACGGGCTTCGTCCTTTTG
Clostridium bartlettii DSM 16795
CLOBAR_01791 tyrS -291 123 AAAAAGCTAAGATAAGGAATAGTAATAATAATAACTTAAACAGAAAGTTGCCGGTTGATGAGAGGCGCACTAGGGATATTATGAATACACCTTTGAGCTTCACTTTTGAAATATAGTAGGAAGTGACGTGTGCACACGTTATAGTGCAGAGTTTTTAACTCACTGAGGTAGATAATGTGAATTATCTATAAACAAAGGTGGTAACGCGAGATATACCCTCGTCCTTTAGAT
CLOBAR_01591 tyrZ -78 21.6 ATTAAGGTGGTAACGCGTGAGATGCTCTCGTCCTTTT
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