Profile of regulator T-box(Thr) in Lactobacillaceae

Properties
Regulator family:	RF00230
Regulation mode:
Biological process:	Amino acid metabolism
Effector:	Thr-tRNA
Regulog:	T-box(Thr) - Lactobacillaceae

Member of regulog collections

By taxonomy - Lactobacillaceae
By RNA motif - T-box
By effector - Thr-tRNA
By pathway - Amino acid metabolism

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Oenococcus oeni PSU-1
	OEOE_0460	thrS	-211	63.6	TAAACATCGAGACCAGAAGCCGTAGTAGTTTGTCAAAGAGAATCGGGTTGGTGAGAACCGATACAAATGAGCGCGAAACTGACTAGCTCTAATAAATCATAAACAGAATACCAAAGAGGCCATTACCTTTAATGGTGAAGTTGGGTGGTACCGCGTTGTAAAAACGTCCCTCGTTA
Lactobacillus reuteri JCM 1112
	LAR_1745	thrS	-199	62.3	TCGATTGAAGGATATGCACCTTCAAAGTCCTCTACAGAGAGTAAGTGCCTTGAGTGGAAGTACTTATGAGTGACAATGATGGTTGTACCACCTTCCCTTATTATTAGCCGAGATAAGGCTAGTCGGATCGTGTCCGTTACCGCACCTTAGAGAGGACATTACTAGTGTGTCCTAAAGATGGGTGGAACCACGCTAATTTTTGTTAATTGACGTCCCTGATAC
Lactobacillus helveticus DPC 4571
	lhv_1611	thrS	-253	37.8	ATAATGAGAGTTAATTAAGCGAGACATGATGGTTTTCGATTCAGAGAGAAGAACCTTGTTCTGGAAGTTCTTCAATAGAGAATCACCCCAATCGCTTATTCCCAAAGTTGTTAATTTTAGGTTGGATGCCTTTATCAATCCATAAAGAGGTTAGATTACGCTAACCTGAATTTCGGGTGGAACCACGCTAATTAACGTCCCAGTG
Lactobacillus fermentum IFO 3956
	LAF_1830	thrS	-169	57.3	CAAATGCGGGATACGCCTAACTACAAGCGGTAAACCAGGGAAGGGTGCCATGGCTGGAAGCACCTTTACACGGAGTAGTTAAGGTACCACCCCATTTCTTGCCCCCCGAAATAAGGGGGACCGGGTCGTGCCCGTTACCACACCATAGAGAGGATTTTAAATCCTGAAGATGGGTGGAACCACGCTGAAGTTGTTATTTTCAACGTCCCTAACGT
Lactobacillus salivarius subsp. salivarius UCC118
	LSL_0494	thrS	-263	50.8	TGTAGATTTTGTGAAAGACAAACGGATTACTATGATTCAGGGATGAAAGGCTTGACTGAAAACTTTCAATAATGTAGTATTCTTACCACTTTCATGTATTGTTTAATGAAAAGTTAGACCGGTGCGACCGTTAACAGCACAATGAGTAGTTTGTTTAAAGCTAAAAATTAAAGGTGGAACCACGTTAATAGCGTCCTTAATAC
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
	LBUL_1401	thrS	-239	49.6	AGTAAATAGAAGACATGATTCCTCCCGCTTCAGAGAGAGGGGCCCAGTTCTGAAAGCCCCCATTTGGGAGGAACCCCACCTTCTATGACCCCAAAAGATAAATGACAAGGTTGGACGCCGTTATCAGTCCAATAAGAGAGGCCGCTTTAGGCCTGAATTTTGGGTGGAACCACGATAATTAATCGTCCCGAGC
Lactobacillus acidophilus NCFM
	LBA1543	thrS	-240	36.9	ATTGAAATTAATTAAGCGAACATGATGTTTTTCAACTCAGAGAGAGGGGCCTAGTTCTGGAAGCTTCTCATTAGAAAAACACCCCAATCGTTTATCCCAAAATTGAAAAGAGATAGGTTGGATACCTTTATTAATCCATGTTAAGAGGTTAGATAAACGCTAACCTGAATTTTGGGTGGAACCACGCAATTAACGTCCCAGTG
Lactobacillus johnsonii NCC 533
	LJ1645	thrS	-238	40.3	AAAGTCAATGAAAGACATGATTTTCTTCAATTCAGAGACAGGAGCCTAGTTCTGGAAGCTCCTGATTAGAAGAAAACCCCAATTTCATTCCTGAAATTTTTTATATTTGGTTAGGTACCATTAACGACCTTTAGAGGAATTAATTTTGTAATTAATTCGAATTTCGGGTGGAACCACGTATTTTAACGTCCCAGCA
Lactobacillus plantarum WCFS1
	lp_1514	thrS	-295	65.3	GAAAACAGATGCAAAAGACACGCTTTGTTTACCATGGATTGCAGAGACCAAGACCTTGTTCTGGAAGTCTTGGACCGGGTTTACGAAGATACCACTTTTGTGAACATGCTCAATTGAGCCGGAACGCTTCCGTTATTAGCGCTAATGAGTCAGTGTCTTTGATGACACTGAAAAATCGGGTGGAACCACGTCAATGACGTCCCTAATGC
Lactobacillus casei ATCC 334
	LSEI_1703	thrS	-262	59.7	GAAGCTATCGAAGACGGAAGCAACAAAGGATCATCCAATAGAGAGCGAGACCATGGCTGAAAGTCTTGCAAGATCTGATCCGAACCACTTCTCGAGATTGCCGCAAGGCCCTGTTACGCAGGTTACGCGTCAATTAAGTGGCCAACAGCCGGTGCTGTTGGCAAACTGGGTGGAACCGCGATCACTGATCGTCCCTGAT
Lactobacillus brevis ATCC 367
	LVIS_1036	thrS	-280	60.2	CAAAAGAGCTATGACGAAAGACATGGTGTTACCGGAGTTCGTTTACAGGAAGAGTTGGCCTAGCTTGGAAGCCACTTAGCGCCCGGAAGCATTACCACTTTCTTAGCTGTTGGAAGGAAATTTCCGACCGGTCCGTTCCGTTAACGACGACTAGAGTTCACGGGAGTAGTCTCGTGAAAAATATCGGGTGGAACCACGTTATTGACGTCCCCAGT
Lactobacillus sakei subsp. sakei 23K
	LSA1400	thrS	-278	63	GAGTCAATCAACGATGAAAGATACCTTTTAAATGGCAGTATTGATCAGGGAGAAAAACATAACTGAAAGTTTTTCATAAGGACATTTAATTGACCACTTTCTAGAGGCTTAAGTCAGTCGGGTCGTTTCCGTTAAAGACGCTTAAAGTTGGAGAATCACCATTTGATTCTCAATCTGGGTGGAACCGCGAAATCAATTCGTCCCTGAG
Pediococcus pentosaceus ATCC 25745
	PEPE_0694	thrS	-196	55.7	TAAAACTTCCCACTTGACTAGAGGCTGGGCGCAATCCCAGTTCGGTTGCCACCGTTATGGCTTTTAATCGAGTGGTAGATAGTTTTTTAACTGTCTACAATTAGGGTGGAACCGCGTGAATAATAAATGACAATCACGTCCCTGGTAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
	LEUM_0515	ansP	-312	71.4	TAAAAACGTTGAAGAGGAAGAGTACTAATAGTTGTTGTTTGAGAGACGTCATGGCTGGTGAAAATGACGCAATGCTGTTTGGAAAACTACCTTGGAAGTGACATACGAGTAGCACGAGTGAAAGTATGACCGGAGTCATTGGTCGTTAACCTGATGAAAGAGTTAAGATGAAGCGCAGCTAATAAGGAATTAATTATTTTTGCTTAAGCTTTATCTTGAACTATTCATGAGGTGGTACCGTGCAAAAAGCGCCCTTAGATT
	LEUM_0662	thrS	-294	96.4	CAGAAACATTGATAAGGACAACTCGATTGTCATGCACTTAAAGAGAGTTCATGTTTGGTGAAAATGAGCAGTGCATACATAAGAGACTACCTTTGAGTGGTGATTTAGTAGTTTTAAATGAAAAGTTGCCCGGGTGATACCGTTATATATCATTTGAGAGAAATAGGAATTTTTCCTGTTTTAAACTTGGGTGGTACCGCGGTAAAACGTCCCTTTAGA
Lactobacillus rhamnosus GG
	LGG_01754	thrS	-320	55.6	GTAACTATCGAAGACGGAAGCAATAAAGGATCATCTACTAGAGAGTAAGGCCGTGGCTGAAAGCCTTGCAAGATCTGATCCGAACCACTTCTCGAGATTGCCCTAATGGCCCTGTTGCGCAGGTTACGCGCCAATGAAGTGGCCCGCAGCAAGACTGTCGGCAACCTGGGTGGAACCGCGATCACAAATCGTCCCTGAT

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Profile of regulator T-box(Thr) in Lactobacillaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --