Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator T-box(Pro) in Clostridiaceae

Properties
Regulator family: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Pro-tRNA
Regulog: T-box(Pro) - Clostridiaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Clostridium kluyveri DSM 555
CKL_0602 proS2 -285 115 AAAATGCAAAGAAGGGGACTAGTAAATTTTATATTCTTTTTTAGAGAGGAAACATCTGGTGAGAGTTTCTAAAGAATTATTTTGAACCTGCCCTGGAGTTTCTGTATTTTAATTATTAGAGTGCAGCGGTGATAATCGTTAAAGTTTTAAGCGAGTATATTTGGTATCAAATATATTAATCAGGGTGGTACCGCCGATATAACCTCGGTCCCTTTAGG
Clostridium phytofermentans ISDg
null proS2 -344 110.3 GAAAGTTGCGATGAAGAGGAATAGTATATAGGTAAGTCATTTTAGAGAGAGAGTGGCTGGTGAAAACTCTTATGAAGCCGAATAGAACCTACCTTGGAGCACTGTACGCTATAAATATAGCATACGTTATGATAATAACATATCGTATAAAATACAGCGTAAATCGGCGTTAACGATAGGAGTGAATTGCGCAAGCAATTAATTTGGGTGGTACCACCGAAGTTTCGGTCCCTTGT
Clostridium tetani E88
CTC02625 proS -250 73.6 TAAAGTGACTATGATAAAGAATAGTAGAAACTATTATAAAGAGAGAAGATCCCTTGGCTGAAAGATTTTCGTAAGTTTTGAACCTACTTTAGAGTCTGTAGTGAAAACTACCGGTATAATAGCCGATATTAGATTGAGTAAAAATTAGGTGGTACCGCGGATATTCTCGCCCTAAAG
Clostridium acetobutylicum ATCC 824
CAC3178 proS -206 71.1 TAGTAAAACTGTGATAAAGAATAGTAGAAGCTTCATAAATTCAGAGAGAAAATCCATGGCTGAAAGATTTTCAACCTAGCTTTGAACCTGCTTTTGAGTTTTAATTAATGAGTACAAATTTAGGTGGTACCGCGATCATACTCGCCCTAATA
Clostridium botulinum A str. ATCC 3502
CBO3344 proS2 -270 117.4 TTTTATAGCAAAGAAGAGGAATAGTAAATTCCTAGGCTTTTTACAGAGAGGGATGTAAGATGAGAATTCCTAAAAGCTAAGTTTTGAACCAGCCTCCGAGTTCTGTACTGAATTTAAGTAGGATACAGCGGAAAAATTCCGTTATCAATAAAAGTGAACATATTTTATATATGTTAACAAGGGTGGTACCACCGACACAACTTCGGTCCCTGTA
Clostridium novyi NT
NT01CX_0337 proS2 -300 113.1 TTATGACTAAGATAAGGAATAGTAAAATTTCATTCTTTTCAAAGAGAAGAAACTATTTGGTGAGATGTTTCTAAAAGAATACTTTTGAACCAGCCTTTGAGTTCTGTACTGAAATTATAGTAGGATACAGCGGATTTTACCGTTATAAATTTGAGAGAATATATTAATTTAAATATATTAATAAGGGTGGTACCACCGTAAGCTCGGTCCCTATGGG
Clostridium perfringens ATCC 13124
CPF_2738 proS -273 83.1 TGTAAAGACTGTGAAAAAGATTAGTAGAAACGCTTATACAGAGAGAAAATACTAGGCTGAGAGATTTTCAACATGTTTTGAACCTACTTTGGAGTCGTAGCAAAAAACTAACCGGGTTTAATACCGTTAACAATGAATAGAGTACAAATTTAGGTGGTACCGCGAAATACAAGCTCGCCCTAAAG
Clostridium difficile 630
CD0049 proS -271 127.9 AATTAGCTATGATAAAGAAATAGTAAAATGATGAAATCTTCACAGAGAGAAAACGGTGGTGAGAGTTTTCAAGAGGAAGTCTTTGAACCTGTCTTTTAGCTTAAAGGTATAAAAATCTTTACGGTAGGAACCGTTATATTCCCAAAAGAGAGCTATTCATATAGCTAACTAGAGTGGTACCGCGGAAATTAAACCTTTCGTCTCTATACT
Clostridium beijerincki NCIMB 8052
Cbei_0130 proS -326 80.8 GTAAAACGTTGATGAAGAATAGTAGAAGTCGATTATATAAGAGAAAAAGTCCGTGGGCTGAAAGACTTTTAAACAGGCTTTGAACCAGCTTTTGAGTATAGGGAAAAACTATCGGTCTAAAACCGTTATCATTGCTAGAGAACAAATTTAGGTGGTACCGCGATATAAAGTTCGCCCTAATATA
Clostridium sp. OhILAs
Clos_0465 proS2 -267 114.2 ATAAATCTATGATGGGAAATAGTAAAAAAGGATGCTTTCCAGAGAGAAAACCATTGGTGGAAGGTTTTTAAGCTTTAATTTTTGAACCAGTCCTTGAGTGAAGAGTTGAAAAAAAGTAGATTCTTCCGGTTCGTGCCGTTATACGATGAAGGGAACCTTTTGGGTTAATTAGAGTGGTACCGCGGGTGAATACAGTCTCTCGTCTCTATTGT
Clostridium scindens ATCC 35704
CLOSCI_01983 proS2 -311 104.7 ATTTGGCAATGAAGAGGATTAGTACATGTAAGCGAGCCTCAGAGAGGGGATCATCTGGTGCAAGATTTCCGCTTAGAACTGCATGGAACCCGCCTTGGAGCCACTGCATGAAAGTGCAGCGTCCTGCCAGCGTTAATGGTTAATGAGAGAACTGCGAAAGGGTCGCAGTTAACTAGGGTGGTACCGCCGAGCTTTTCGGTCCCTTTTTA
Clostridium nexile DSM 1787
CLONEX_03542 proS2 -297 107.3 AATATTGGCTGTGAAGAGGAATAGTATATACAGGACGAGCCACAGAGAGAGAATTGATTGGTGAAAGATTCTTGCAAGAAGTGTATGGAACCTACCTTGGAGCCACTGTGTGAAAATGCAGCGTGACATCAGCGTTAATGATGACTAAAGAGAATTGTAGAGGAATCTATGATTAATTAGGGTGGTACCGCCGAGTCTTTCGGTCCCTTTT
Clostridium hiranonis DSM 13275
CLOHIR_01549 proS2 -290 119.9 TGATTGCAATGATAAAGAAGTAGTAGGTAGTGAAAGTCTTACAGAGAGGAAATGTTGATGAGAAATTTCTAGATGGAAGCAACTGAACCAATCTTTTAGCTTAGAGGGGTAGCAACCTCTACGGATGGAGCCGTTATACTCCAGCAAGAGAATCACATGTTTTGTGATTAACTAGAGTGGTACCGCGGAAACTATGCCTTTCGTCTCTATTAA
Clostridium butyricum 5521
CBY_2151 proS -394 87.7 TTTTAGAGCAATGATGGAGAATAGTAGAAGTCGCCCTTTAAGAGAAAAAGTCCTTAGGCTGTAAGACTTTTAATAGACTTTGAACCAGCTTCGGAGCAGTAGGAAAAAACTATCGGTTTAATACCGTTATCATTATTTAGAGAACAAATTTAGGTGGTACCGCGAGTTGATTCGCCCTAATA
Clostridium bolteae ATCC BAA-613
CLOBOL_06453 proS2 -309 95.7 AGATATGACATGGAAAGGGAACAGTAAGCGTGATTGCACGTCACAGAGAGAGGGCCGCAGGTGAGAGGTCCTTACGGTTGGCAGATGCTGAACCCACCCTGGAGTCCTGTATGATGAATGCAGCGTATGTCCGGCGTTAACGGATGATGAGAGAACCATAAGGGCGGCTTAAGCCCGAAGGTTAATAAGGGTGGTACCGCCGAGTCATTCGGTCCCTTGT
Clostridium bartlettii DSM 16795
CLOBAR_00190 proS -278 122.9 CAAAAGCAACGATTAAGAAATAGTAAAAAATGTGAGTCTTTACAGAGAGGGAGCATTGGTGAGAGTTCCCAAGATAATGTTTTTGAACCAGTCTTTTAGCATAAAAACGGTAAAAAGTTTTTACGGTAGGGACCGTTACATCCCCATGAGAGAGCTTATTACAAGCTAATTAGAGTGGTACCGCGGAAATATAACCTTTCGTCTCTTTTAA
Export
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise