Regulog T-box(Pro) - Clostridiaceae

Properties
Regulator type:	RNA regulatory element
Name:	T-box
RFAM:	RF00230
Regulation mode:
Biological process:	Amino acid metabolism
Effector:	Pro-tRNA
Phylum:	Firmicutes

Member of regulog collections

By taxonomy - Clostridiaceae
By RNA motif - T-box
By effector - Pro-tRNA
By pathway - Amino acid metabolism

Statistics of regulated genes
Genome	Genes	Operons
Clostridium kluyveri DSM 555	1	1
Clostridium sp. SS2/1
Clostridium cellulolyticum H10
Clostridium phytofermentans ISDg	1	1
Clostridium tetani E88	1	1
Clostridium acetobutylicum ATCC 824	1	1
Clostridium botulinum A str. ATCC 3502	1	1
Clostridium novyi NT	1	1
Clostridium perfringens ATCC 13124	1	1
Clostridium difficile 630	2	1
Clostridium beijerincki NCIMB 8052	1	1
Clostridium sp. OhILAs	1	1
Clostridium sp. L2-50
Clostridium scindens ATCC 35704	1	1
Clostridium nexile DSM 1787	1	1
Clostridium leptum DSM 753
Clostridium hiranonis DSM 13275	2	1
Clostridium butyricum 5521	1	1
Clostridium bolteae ATCC BAA-613	1	1
Clostridium bartlettii DSM 16795	1	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																					Function

CRON 1.
proS2	* Clostridium kluyveri DSM 555 Site: position = -285 score = 115.02 sequence = AAAATGCAAAGAAGG... Gene: CKL_0602: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Archaeal type	Clostridium sp. SS2/1 Gene: CLOSS21_00467: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Archaeal type	Clostridium cellulolyticum H10 Gene: Ccel_0345: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Archaeal type	* Clostridium phytofermentans ISDg Site: position = -344 score = 110.28 sequence = GAAAGTTGCGATGAA... Gene: null: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Archaeal type	Clostridium tetani E88	Clostridium acetobutylicum ATCC 824	* Clostridium botulinum A str. ATCC 3502 Site: position = -270 score = 117.45 sequence = TTTTATAGCAAAGAA... Gene: CBO3344: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Archaeal type	* Clostridium novyi NT Site: position = -300 score = 113.1 sequence = TTATGACTAAGATAA... Gene: NT01CX_0337: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Archaeal type	Clostridium perfringens ATCC 13124	Clostridium difficile 630 Gene: CD0050: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Archaeal type	Clostridium beijerincki NCIMB 8052	* Clostridium sp. OhILAs Site: position = -267 score = 114.18 sequence = ATAAATCTATGATGG... Gene: Clos_0465: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Archaeal type	Clostridium sp. L2-50 Gene: CLOL250_02969: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Archaeal type	* Clostridium scindens ATCC 35704 Site: position = -311 score = 104.69 sequence = ATTTGGCAATGAAGA... Gene: CLOSCI_01983: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Archaeal type	* Clostridium nexile DSM 1787 Site: position = -297 score = 107.31 sequence = AATATTGGCTGTGAA... Gene: CLONEX_03542: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Archaeal type	Clostridium leptum DSM 753 Gene: CLOLEP_03755: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Archaeal type	* Clostridium hiranonis DSM 13275 Site: position = -290 score = 119.93 sequence = TGATTGCAATGATAA... Gene: CLOHIR_01549: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Archaeal type	Clostridium butyricum 5521	* Clostridium bolteae ATCC BAA-613 Site: position = -309 score = 95.68 sequence = AGATATGACATGGAA... Gene: CLOBOL_06453: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Archaeal type	Clostridium bartlettii DSM 16795	Prolyl-tRNA synthetase (EC 6.1.1.15) ## Archaeal type
proS	Clostridium kluyveri DSM 555	Clostridium sp. SS2/1	Clostridium cellulolyticum H10	Clostridium phytofermentans ISDg	* Clostridium tetani E88 Site: position = -250 score = 73.64 sequence = TAAAGTGACTATGAT... Gene: CTC02625: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Bacterial type	* Clostridium acetobutylicum ATCC 824 Site: position = -206 score = 71.07 sequence = TAGTAAAACTGTGAT... Gene: CAC3178: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Bacterial type	Clostridium botulinum A str. ATCC 3502	Clostridium novyi NT	* Clostridium perfringens ATCC 13124 Site: position = -273 score = 83.09 sequence = TGTAAAGACTGTGAA... Gene: CPF_2738: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Bacterial type	* Clostridium difficile 630 Site: position = -271 score = 127.91 sequence = AATTAGCTATGATAA... Gene: CD0049: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Bacterial type	* Clostridium beijerincki NCIMB 8052 Site: position = -326 score = 80.76 sequence = GTAAAACGTTGATGA... Gene: Cbei_0130: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Bacterial type	Clostridium sp. OhILAs	Clostridium sp. L2-50	Clostridium scindens ATCC 35704	Clostridium nexile DSM 1787	Clostridium leptum DSM 753	Clostridium hiranonis DSM 13275 Gene: CLOHIR_01550: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Bacterial type	* Clostridium butyricum 5521 Site: position = -394 score = 87.7 sequence = TTTTAGAGCAATGAT... Gene: CBY_2151: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Bacterial type	Clostridium bolteae ATCC BAA-613	* Clostridium bartlettii DSM 16795 Site: position = -278 score = 122.92 sequence = CAAAAGCAACGATTA... Gene: CLOBAR_00190: Prolyl-tRNA synthetase (EC 6.1.1.15) ## Bacterial type	Prolyl-tRNA synthetase (EC 6.1.1.15) ## Bacterial type