Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator T-box(Phe) in Clostridiaceae

Properties
Regulator family: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Phe-tRNA
Regulog: T-box(Phe) - Clostridiaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Clostridium kluyveri DSM 555
CKL_3192 pheS -314 104.5 TTAGAATACTGTGAAAGAGAGAGTAGATATACGAAAGTTTTTTAGAGAGAAAAAGTTATGGCTGAGAGCTTTTTTAAAATGGAAGTATATTGAAGTTCGCTCTGGAGTACTTGCTGTGAAATTAAAGTATCTTTCAATCAATAATAAGCTAAAGATATCAAGTAGCAGCTAAGCGGGAAATACCGATAAATATACAAAGAGGATATTATTTTTAATGTCAATTTGGGTGGTAACGCGGATTAGTTCGTCCCTTAG
Clostridium sp. SS2/1
CLOSS21_00170 pheS -313 90.5 TAAAGGCATTGATGGTGCACAGTAAGAAACCAAAAGTTTCCGAATTTCACACCGTAGCTGTATCTTTGAATGTGATGCAATGTCATTTAAGCATCAGTAGGAGATAACGGAGTCTGCCCGTTACGCAGAGACTTAAGTGCTTATGGTAATTAAGAAGAAGTTTAACGATACCATAGGAATTAGGGTGGTACCGCGAGTATATATTAAGAACTCGTCCCTTTGCG
Clostridium cellulolyticum H10
Ccel_1442 pheS -292 130.3 CAAAAGCAATGATGGAGAAAAGTAAGCGAGAAACGGATATTCCAGAGAGAAGGTATCAATGGCTGAAAGTACCTTTATTATACAGCTTGCCCAAGTTCCCTCCGGAGCTGCAGCTTTGAACCGTGTTATGATATTTTTCATATGTAGAGGCTGCCGGTTAAAACCGTTATATTTACAAAGAGTCCGGATATTCTATTCGGAAATCTGGGTGGTACCGCGAAGATAGCCTTCGTCCCTTTATT
Clostridium phytofermentans ISDg
null pheS -499 86.4 GAAAAAGGCTATGAAGGTGTTGCCACAGGCAACCAGATTAAACTTTTCTATCAGAGAGAGGAAGTCATCGGCTGAAAGCTTCCTTAAGTTCAAAGTTTAGTTGATTTTCTCACCGGAGCCGCATATTTGAATTTGTTAATCAACCTCCACAAAATTAAAGTCACAGGGTTAACATTAGTAGGATATGACGTATATGCACGTTACGCATGACTTAAGTGCCTATGATAATTTTTGTTTTTATTATAGGAATTAGGGTGGTACCGCGGGTAGCTTTTATACTCCGTCCCTGTT
Clostridium tetani E88
CTC02278 pheS -262 97.5 ATAGTAAACTATGACGAAGAGAGTAAATGTAAAAATTTTTCTAGGGAGAAAAGGTCAAGGACTGAAAGCTTTTTTATTAATTTTTATATTGAAGTTCGCTTCTGAGTTCTAATTGTGAAATTTAGTAGCAATTAGCGGACATGAACCGATATTCATAGAGCTGGATACTTTTGTATCAACAAGGGTGGCATCGCGGAGTAAAGTTCGTCCCTATT
CTC00787 brnQ1 -360 107.4 TAAAAATTATGATGGAAAGCAGTAATTGTATGATTTATAAAGAGAGGCAATGGTTGGTGGAAATTGCTTAAAGAGTACAATGAAACATTCATTCCTGAATTGCAGGCTGAAAAAAATTTAAATTTTTAGTAGGCTGAGCCGGATACCTAACGTTAATAAGGGTATAAAGAGGATTTGTGTCAATCAAATTGGGTGGTACCGCGAATAATAATCGTCCCTTGTAG
CTC00787 brnQ1 -121 23 TAGGTATTTTTTATTCAATTGGGTTATGCAAATCAACTAGGGTGGTAACACGGAGCATCGTCCCTTT
Clostridium acetobutylicum ATCC 824
CAC2357 pheS -270 116.2 AATAAAAACATTGAAAGAGAGAGTAAATATAATGAGACTTTAAGAGAGAAAAGGTTAATGGCTGGAAGCCTTTTTAAGTTTGAGTTATATTGAAGTTCACTCTGGAGTTCCATTTGCGAAATGTGAGTCTTACAAATTAGTAAATGGCGGTTACATATCGTTAAAATTTTGAGTGGGTTATCCAATTTGGGTGGTACCGCGGAAATTCTCCGTCCCTTTT
Clostridium botulinum A str. ATCC 3502
CBO3131 pheS -290 114.9 ATATTAAACTATGATGAAGAGAGTAAGTTTAAAATATTTTTAAGAGAATGTGGGTCTTAGGCTGAAAGCCTACTAAAATGTTTTATACTGAAGTTCACTTCTGAGTTCTAAAAGTGAAATAGTAGTAGCTTTTAGCGATACAGTATCGATAACACTGACTAAGAGAATATAAATTTTTATTTATATTAATTAGGGTGGTACCGCGGATTTAGTTCGTCCCTTTA
Clostridium novyi NT
NT01CX_1767 pheS -273 112.5 TTTAAACTATGATAGAGAGAGTAGATATAGAAATTTTTAAAGGGAGAAAAAGTCATAGACTGAGAGCTTTTTCAAAAGGAATATATTGAAGTTCACTCTGGAGTTCTAAGTGTGAAATTAAAGTAGCATTTAGCGGCATATGTCGATAAAATCTCAAGAGAATTGAAAATTGATATTTTCAATTAATAAGGGTGGTAACGCGGAATAACTTCGTCCCTAGTTT
Clostridium perfringens ATCC 13124
CPF_2140 pheS -397 124.5 GATAAAAACATTGATAGAGAGAGTAGATATAGTAATTTCTTATCAGGGAAAAAATGCCATGGACTGAAAGCATTTTTAGAAACCTATATTGAAGTTCACTCTGGAGTTCTAACTGTGAAATATAAAGTAGTAGTTAGCGGCATAGTCGTTATTTGAAATTAAGTGAGTACTAATTTTTTTAGTACTAATTAGGGTGGTACCACGGATATGAATACCCCGTCCCTTGT
Clostridium difficile 630
CD0699 pheS -274 117.1 TAAATGCAATGAAAGAGGAAAGTATTTTGATTAAACTTAGTAAAGAGATAAACACCTAGGCTGGGAGTGTTTTCTAAGAGGTCATGAGAAGTTCCCTCTGGAGTAACAGAGCTGAAATTTTACAGTAGGCTTTGACGTCAAAAACGCGTTAAGTTTGTTAGAGGTGGTTTGATGATTTTTAAATTGTTAAACTACTAGGGTGGTACCGCGAAACTATAGCCTTTCGTCCCTAGACA
Clostridium beijerincki NCIMB 8052
Cbei_1573 pheS -339 113.6 GAAAAACTGTGAATGAGAGAGTAGATATTAGAAAAGTTTTAAGGGAGAGAAGGTCATAGACTGTAAGCCTTCTTAAATAATATAATATTGAAGTTCGCTCAGGAGTTCTAGCTGTGAAATTTATAGTAGTAGCTAGCGGCAAGAAGAGTCGTTAATTAAATTGAGTTGGGTACTTTTTTAGTTCCAATTAGGGTGGTAACGCGGATAATTCGTCCCTTTTTA
Clostridium sp. OhILAs
Clos_1972 pheS -397 118.2 AACAAAAGCGTAGAAGGAGAAAAGTAAGTTATAGACTGTTGTAATAGAGAGAGATCCCTTGGCTGGAAGGATCTTATAACAAGTATGGCTGAAGTTCGCTCTGGAGCTGTAACTCTGAAAGTCTTTACAGAGACCGTAGGTTTTACCGGTAGACACCGTTATAGTCTTCGAGTGGTCTATGGTATTTTAATAGATTATTAGGGTGGTATCACGGAGTGTAACCTTCGTCCCTTTC
Clostridium sp. L2-50
CLOL250_00565 pheS -296 84.9 AGAAGACGTTGAAGATGCAAAAGATGGGATATGTCTGACAGAGAGACCGGGTCATCGGCTGGAAGCCTGGTCGAGCACCATATTTCATTTAATTTCACATCCGAGTTTTATCTCTGAGGATTCCTTAAAAGGAAGCGTAGGAGATAACGGGTTATGACCGTTATAACATAGAATGAGTGCTGGCAGTTCCGGGAAGACCGGGTGTCAGAATCAGGGTGGTATCGCGGTTGCTCCGTCCCTTTGTG
Clostridium scindens ATCC 35704
CLOSCI_03569 pheS -279 99.7 AAAAAGCAATGACCGCGTAAGTAGAGACCCATTTCCCATTAGAGAGAGGAGACCCCCGGCTGAAAGTTTCCTTTGGTTCGGATGGCAATCGAATTTCCCGCGCGAGCTGCATTTTTGAAAGATCAGTAGGAAATGCCGTAGGTGCACGTTACGCATGCGGAGAGTGCCTGTGTGAGGATAGCACGCAGGAAGCAGGGTGGTACCACGGGTTATGCCTCGTCCCTTTTGG
Clostridium nexile DSM 1787
CLONEX_03195 pheS -283 110.8 CAAAAAGGCATGGAACGTGTTTAGTAGAGCACTATTTTCTAACAGAGAGAGGAAATCATCGGCTGGAAGTTTCCTTTAGTTCAAATGGGAATCGAATTTCGCACGGGAGCTGTATCTTTGAACGATATAAAGAAAAGTAGAAGATAACGTATCTGCACGTTACGCAGTCCGAGTGCTCATGGAGATTTCTGTGAGAAGTAGGGTGGTACCGCGATATAGCCTCGTCCCTTTT
Clostridium leptum DSM 753
CLOLEP_02088 pheS -317 117.3 AGAGAACGCAGTGAAAAAGGAAGTAGTCCTTTAGAGCGGTTTTTCAGAGAGGCCGGGTATGTTTTTCATGCTGAAAGTCCGGCTATTACTGTAAAAGGATGAAGTTCCCTTTGGAGCGGCATGGCTGAACCTCTTATGTAGGCCATGACGGCCGGCACCGTTATCCGCCGAAAGAGTGTTTGCTCTGCTGCAAAAATTAGGGTGGTACCGCGGAGATACGTCTTCGTCCCTTTC
Clostridium hiranonis DSM 13275
CLOHIR_01898 pheS -318 113.8 AATTAATGTTGATAGAGAAAAGTACTGTGAACCATTTCAGTAAAGAGATAGATTGTCGTTGGCTGTGAGCAATCTTCTGAGATATCATAGGAAGTTCGCTCTGGAGTTTCTAAGCTGAAATCTTACGATGTGTAGGTTTGGACGTATAAGATGCGTTAAATCTTTTGAGGTGGTCTAATTAAAGTTTATTAGGCTACTAGGGTGGTACCGCGGAATTATAGTCTTTCGTCCCTAGCTG
Clostridium butyricum 5521
CBY_3151 pheS -368 95.2 TAAAAATTGTGATTGAGAGAGTAGCTTTTATGAAGTTTTCAGGGAGAAAAGATCATTGGACTGGAAGTCTTTTTAAATGAAGTAATTGTGAAGTTCACTCAGGAGTTCCAGCTGTGAAGTAATAGTAGCATCTGGCGGCATATATATGTCGTTATTAAAATTAAGCTGGGTAGCCTTTTAGGTACCAATCAGGGTGGTAACGCGGATAATTCGTCCCTTTTTT
Clostridium bolteae ATCC BAA-613
CLOBOL_02009 pheS -276 90.4 ATCAAAAGCGATGAAGGTGCATAGTAGACGTTTATTTTCCATCAGAGAGGGGAGGCCACCGGCTGAAAGCCTGCCCGGGTTCAGATAGACGGTTGAAATTCCCACCGGAGCTGTACGGGCAAAAGGATGCTTTCGCCAATCCGTGAAAGGATTCCGGTAGTCTGTGACGCAGGCACACGTTACGTGCATCAAGTGTCTGTATACTCCAGTTATAGGTTCTGGGGTGATACAGGAAGCAGGGTGGTACCGCGAGTTTACAGTCTCGTCCCTTCA
Clostridium bartlettii DSM 16795
CLOBAR_01296 pheS -303 129 AGAATTTACGGTGAAAGAGAAAAGTATTTTAAATAATTCTATAACAGAGAGTAACACCAAGGCTGTGAGTGTTATATAGATAGTTTAAAAGAAGTTCACTCTGGAGTATCAAATCTGAAATTAAGTAGGTTTTGACGTTTGAAACGCGTTAAGTTTCTTCGAGTGGTTTATAAATATATATTTATAAGCTACTAGGGTGGTACCGCGAATAATAGCTTTCGTCCCTAGC
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