Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator T-box(Ala) in Clostridiaceae

Properties
Regulator family: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Ala-tRNA
Regulog: T-box(Ala) - Clostridiaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Clostridium kluyveri DSM 555
CKL_1324 alaS -250 86.4 ATGTGGCAGTGAATAGAAGAAGTAAATATATTCTTATATGTAAAGAGAGGAAGTAGAGGGTGTAAAGCTTCTCATATGAGGTTTATTGAAGGCTGTCTAGGAGCCTATTATGGTGTTTGAGAGATATGGATTTTATAATTTTAAATCTATATAATTAGGGTGGTACCGCGAAAAACTTTCGTCCCTTTTAT
Clostridium cellulolyticum H10
Ccel_2209 alaR -332 99.8 TAAAAATGCTGTGAAGGGGAAGAGTAAGTATTTCATCAGATTTAAGAGAGCCGGAGGTACATTTTATATGTCAGGTGGGAGCCCGGTACTGGTGTATATCGAAGGCAGCCCTGGAGTAGCTTTTCGAAAGCAAATATTTACGAAAATATTCTGTTAGTAGAAAAAGACGTTAGGCCACGTTACAGGCTGATGGTGTAAGCAATAGATATTTTTGTTGCCGCACTTTTTAAGGAGAATGCTTATGGCATTAATTAGGGTGGTACCGCGGAAACCTTCGTCCCTGTT
Ccel_2096 alaS -289 117.3 AAGAATGGCAATGAAGGAAAGAAGTAGTTTAATGTTTCTGACTAAAGAGAGAGGACGGTTGGTGTGAGTTCTTGCAGAGCATTTTATGAAGCAGTTTCCAGAGCTTCTGTCCGGTAAAAAGGACGGACGCTGTCACAGCGTTATTGTGAATTTACTAAGAGCCCCTTTCGGGGAATTAGGGTGGTACCGCGTGAGATATCTCTCGTCCCTTTG
Clostridium phytofermentans ISDg
null alaS -307 100.8 AAAAGGCAAGGAAGAGAAATAGTATATATCGTGGAAGTTTCAGAGAGAGGATGAAAGGTGCGAATCCTTACAGAAATGATATAGAAGCAGTCTTGGAGCTGTGAACCGAACAGAGTAATCTAAGTAGATTTCACCGGATTTCCACCGTTATAGGGAAAAAGTATCGGAGCAATCCCGTACTGGTGAGAGCAGAGTAAAATCTGAAATTAGGTGGTAACACGGACAGAATAGTTCGCCCTAAGCTA
Clostridium tetani E88
CTC01055 alaS -228 102.1 TTATGACAATGATAAAAAGGAGTAAATATTTAATTATTATAAAGAGAGGAAGTGGAAGGTGAAAACTTCTTAATAATTGTATTGAAGCTATTTTTGAGTCTTTAGAACTTTAAGAGATACAATTTTATATTGTATAAATAGGGTGGTACCGCGGAAGCTTTCGTCCCTTATAG
Clostridium acetobutylicum ATCC 824
CAC1678 alaS -223 99.1 TTAGAGTGATGATGAGAATTAGTAAAATCAATTTGCATATAAAGAGAAGAAGTGGTTGGTGAAAACTTCCTATGTAATGATTTGAAGCTATCTCTGAACTTTTTTAAGAGAGACACTTTATTTTAGTGTAATTAGGGTGGTACCGCGGAATTATAGCTTTCGTCCCTTTGTT
Clostridium botulinum A str. ATCC 3502
CBO2564 alaS -234 90.3 ATATATAGTGATGATTAAAAGGAGTAAGTAAAGTAACTTTATATAGAGAGGAAGTGGTTGGTGAAAACTTCCTAAAGTTTGTACTGAAGGCTGTTTAGGAGCTATGCTGCAGGAGTTGTGAATACAGTTTTTGTATTTAAATTAGGGTGGTACCGCGGAATATAACTTTCGTCCCTTTT
Clostridium novyi NT
NT01CX_2280 alaS -254 91.4 ATATTAGGCGATGATAAGAATGAGTAGGTAATTTGTTATTATTAAGAGAGGAAGTGGACGGTGCGAACTTCTTAATGCAAATATTGAAGCTATCTTGGAGTCATATTAAATTAAGAGGTATATGTACATAAATTACATTTTATATGTATTCATATATAACTAGGGTGGTACCGCGAAAACTTTCGTCCCTTGA
NT01CX_1456 alaR -312 111.2 AAAAGATTGTGATAAGGAAGAGTATATAAAAGGAGAATTTAAAGAGAGCTTGGAATGGTGAGAGCCTGGCAATGGAATTTTATAGAACGCAGCCTTTGAATCGCTTATTGAGAAATGAGAATTAAGTTTAATTCTTAAAATAGATACAGACGTGACCTCGCGTTATTGAGGAATGAAATTATAAGTTTCAGTAAAGAGAGTGCAATTTGCACTAATCAGGGTGGTACCGCGAAAACTCCTTCGTCCCTTTAGG
Clostridium perfringens ATCC 13124
CPF_2033 alaS -330 102.5 ATGAAAAGCGTTGACGAGAATGAGTAGGCATTTATCTTTTAGTCAGAGAGGAAGTGGTTGGTGAGAACTTCTTAAAAGAGATGTTGAAGCTATCTTTGAGCTATAATTTTTAGAGTGATGTAGTTTTACATAATTAGGGTGGTACCGCGGAGCATAGGATTTCGTCCCTTTT
CPF_0706 alaR -435 63.1 GAAAAACAGTGAAGAGAAAGAGTAAATTAGGTGGACTTTTCAGAGAGCTAAAGTTTGGTGAGATTTAGTAAGAAAGCTTAATTGAAGCAGTCTCGGAGTTTCTTGTTGAGAACTAA
Clostridium difficile 630
CD1282 alaS -305 125.2 CAAATACAGTGATAAGGAATAGTAAAATATTTGATGTCTTACAGAGAGAGGGAAATGCTGGAAGCCCTTAGAATATGATATTTGAAGCAGCCTTTTAGTAGCAATCTTGAACAATTTATCTTTTATAAAGAAGATTTAAGTAGAGATTGACGGTAGTTACGTTATAGCTAAGGTTTTCCGAAGATATCATACTTTGTATGATAATTAGGGTGGTACCGCGATTGTCCTCGCCCCTATAAA
Clostridium beijerincki NCIMB 8052
Cbei_1104 alaS -454 101.7 ATTAAGCGATGAATAGGATAAGTAAATTTATCATAGTCATTTCAGAGAAAAAGTGGTTGGTGAAAACTTTTGGCTATATATTTTGAAGCTACCTAGGAGCTATAAATTACTAAGTGATGTATGATTATATCATACATAATTAGGGTGGTACCGCGGAATTCTAGCTTTCGTCCCTATATC
Cbei_4150 alaR -323 115.9 TTTAAAGATAGTGATAAGGAAGAGTATATAAATGGTAAACTTTTAAGAGAGCTAGAGGTCGGTGGAATCTGGTAAGTATCCTTTATAGAAGCAGCCTTTGAATTTTATAGCTGAGAAATAAAAATTTTTAGAAAATAAGAATTTTTAATTAGGCTATAACGTGTTCCTCACGTTATAGAGGTGGAGTATAATATGTACTCTAGCTGAGTGAACAATTTTTAAGTTGTTTATTAGGGTGGTACCGCGAAGTAGTTCTTTCGTCCCTTGT
Clostridium sp. OhILAs
Clos_1666 alaS -361 142.9 GTTAAAAGTGATGATGAGAAGGAGTACTATGGATAGATTCTTCTAGAGAAAAGGTTCTAGGCTGAAAAACCTTTAGATATACCATGGGAAGCAGTCTCTGAACAATAATCTTGAATTTCAGTAGAGATTATCGGCAAAGCCGTTATACTTTATTCCTAGAGTGATTGCTATATTTTAGCAATAATTAGGGTGGTACCGCGAGAACACTCTCGTCCCTACA
Clostridium leptum DSM 753
CLOLEP_01892 alaS -245 84.3 AATAGGCTGTGAAGGGCAAGAGAAAGCAAAAAAAAGCGGGTAAGAGAGGGTGCTCCCGGCTGCAAGGCGCCCCTGCTTTTGCTTTCGGCCGGTCTGGAGCTCCGGCTTGAGGAAAGCCGGCGGGCCTTTCCCGTTATCGAAGGCTTAAGCGGCGCGCTTTGACGCGCAATTTGGGTGGTACCACGGATTCCTCCGTCCCATTGTG
Clostridium hiranonis DSM 13275
CLOHIR_01199 alaS -192 113.9 CAAATGCAAAGAAAAGAAGGAGTAAATCTACTGATTTTGCACAGAGAGAGGGAATAGCTGAGACCCCTTGGAATAGGCAGATTGAAGCAGTCTTGGAGCATAAATCTTGAACGTATTTTACTATTAGAGATTTACGGTAGCGACGTTATAGCTAAGGATTACCGGAGAAGCAGATTTTATCTGTAAATTAGGGTGGTACCGCGAATAATACTCGCCCCTATGTT
Clostridium butyricum 5521
CBY_2616 alaS -352 107.6 ATATTAAGCGATGAATAGGAAAAGTAGAATTATTAATAGATATTAAGAGAGGAAGTGGCTGGTGAAAACTTCTTGCTATTGTATTTTGAAGCTGCCTAGGAGCTATAACTTACTAAGTGATGTATATTTTATACATAATTAGGGTGGTACCGCGGAATTTTAGCTTTCGTCCCTTGT
CBY_3896 alaR -418 115.3 GTTAAAGATAGTGATAAGAAAGAGTAGTTTTAGATATACTTTTTAGAGAGCTGAAGTTTGGTGTGATTCAGTAAGTATACTTAAATGAAGCAGTCTTTGAATTTCATACTGAGAACTAAGAATAGATATTCTTAATTAGGTTATGACGTGTTCCTTACGTTACAAAGGATAGAATGTTTAGTTGACATTCTTACTGAGTGAATAGCATACGTGCTATTTATTAGGGTGGTACCGCGAAGTAGTTCCTTCGTCCCTTGT
Clostridium bartlettii DSM 16795
CLOBAR_02185 alaS -285 131.1 TTTAAATACAATGAAGAGAAGTAGTAAGATATTTATATGGCTTTACAGAGAAAAGGTAGTGGTGAGAACCTTTAAGTACAAAATATTTGAAGCAGTCTTGGAGTAGCAATTCGGAGTTTAGTATGAATTGCCGGTAGTTACGTTATAGCTAAGGTTTTCCGAAGATACCACTTTTATAGTGGTAATTAGGGTGGTACCGCGAATATACCTCGCCCCTATA
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