Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator SAM in Clostridiaceae

Properties
Regulator family: RF00162
Regulation mode:
Biological process: Methionine biosynthesis
Effector: S-adenosylmethionine
Regulog: SAM - Clostridiaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Clostridium kluyveri DSM 555
CKL_1803 sbpA -388 101.2 CTTCTTATCAAGAGAGGTGGAGGGACTGGCCCTATGATGCCCGGCAACCTGAATGTATTTACATTCAATGGTGCTAATTCCAGCAGGTAATATAACCTGAAAGATGAGAG
CKL_1307 null -244 100.2 CTTCTTATCCAGAGTGGCGAAGGGACTGGCCCTATGATGCCCAGCAACCTGAATGATTTTTCATCATTCAACGGTGCTAATTCCAGCAGGTATAAAACCTGAAAGATGAGAA
CKL_1033 nifH -310 97.6 TCTTATCAAGAGAGGCGGAGGGACTGGCCCTATGATGCCCGGCAACCTGAATGTTATTTGTTCAATGGTGCCAATTCCTGCGGGGTAACCTGAAAGATGAGATAT
CKL_1036 nifB -276 95.2 TCTTATCAAGAGAGGCGGAGGGACTGGCCCTATGATGCCCGGCAACCTGAATGTTATTTGTTCAATGGTGCTAATTCCTGCGGGGTAACCTGAAAGATGAGATAT
CKL_2782 null -330 71.5 ATTCTTATCAAGAGAAACTAAGGGGCTGGCCCGATAAAGTTTCAGCAACCCGTATGTTTTATTTACATGCAAAGTGCTAAATTCTGCAGATATATTTCTGAAAGATGAGGG
CKL_0822 metN3 -307 85.8 ACTTATTAAGAGAGGCGGAGGGAAAGGCCCTATGAAGTCCGGCAACCAGCATTATGTAATGTATTGGTGCTAAATCCTGCAGCATTGTAGCTGAAAGATGAGGTAA
CKL_1794 tlpB -186 95.3 GCTCTTATCACGAGAGGTGGAGGGACTGGCCCTGTGAAGCCCGGCAACAGCTAGATATTCTAGAAATGTGCTAAATCCTGAAGGATATTTCCTTAAAGATGAGAG
CKL_3054 CD2172 -223 93.3 GTTCTTATCAAGAGAGGCGGAGGGACTGGCCCTATGAAACCCAACAACCGGCATTTATTTCAATATGTATCGGTGTTAATTCCTGCAGAGTTAATTTATACTCTGAAAGATGAGAA
CKL_0525 nifB -415 91 TCTTATCAAGAGCGGCGGAGGGATAGGCCCTATGAAGTCCGACAACCGACATTTTGTGCATCGGTGTCAATTCCTACAGAGTGTGTTAATACTCTGAAAGATAAGAAAA
CKL_0827 null -185 89.3 CCTTATCAAGAGAAACTTAGGGAATGGCCCGATGAAGTTTCAGCAACCACATTTTAATTTTATGTAAGGTGCTAAGTCCATCAGAACATAGTTCTGGAAGATGAGGTAA
CKL_1631 metA -249 92.4 TCTTATCAAGAGCGGTGGAGGGACTGGCCCTATGAAACCCGACAACCAACATTTTATTAAAATGTATGGTGTTAATTCCAGCAGATTATTTCTGAGAGATAAGGAAA
CKL_2180 metY -306 92.5 TTTCTTATCAAGAGTAGTGGAGGGACTGGTCCTATGATACTCGGCAACCTGAATATTTTTATATATTCAATGGTGCTAATTCCAGCAGGTTAAACCTGAAAGATGAGAG
CKL_3334 COG2606 -207 88.6 ATTCTTATTTTGAGAGACGGAGGGACTGGCCCTATGATGTCCGGCAACCTGAATATTTAAGGTGCTAATTCCAGCAGGTATTACCTGAGAGATAAGAA
CKL_0665 metN -184 85.3 ACTTATCAAGAGAGGTGGAGGGAACAGGCCCATTGAAGCCCGGCAACCAATACGTTGTATAATGGTGCCAAATCCTGCAGCGAAGGCTGAAAGATGAGAGAA
CKL_2913 metQ -184 85.9 AGCTTTATCAAGAGCGGTGGAGGGACTGGCCCTATGAAGCCCAGCAACCAGTATTGTTTTTTAATACATTGGTGCTAATTCCTACAGCTTAAGCTGAAAGATAGGGG
CKL_3674 metK -175 99 GCTCTTATCAAGAGAGGTGGAGGGAAAAGGCCCTGTGAAGCCCGGCAACCAGTGCTTTAATCATTAAGGTGCCAATTCCAGCAGTTTTAAAGGCTGCAAGATAAGAG
CKL_1633 metK -256 96.3 TTTCTTATCAAGAGAGACGGAGGGACTGGCCCTATGATGTCCGGCAACCAGAAGATTTTTATTTCATGGTGCTAATTCCAGCAGGTATTAATATGAAAAGCCTGATAGATAAGAG
CKL_0975 metY -268 97 CTTCTTATCCAGAGAGGCAGAGGGACTGGCCCTATGATGCCCGGCAACCTGAATGATTTTTTATTGTTCAACGGTGCTAATTCCAGCAGGTGTGAAACCTGGAAGATGAGAA
Clostridium cellulolyticum H10
Ccel_0087 metK -197 92.7 CCTTATCAAGAGAGGTGGAGGGAATGGGCCCGATGAAACCCGGCAACCAGCATTTTTTGCATGGTGCCAATTCCTGCAGGCTATGCCTGGAAGATGAGGGAT
Clostridium phytofermentans ISDg
null metK -242 62 TCTCTTATTCAGAGTGACGGAGAGTAAAGACTCAGTGAAGTCACGGCAACCCCCTATGGGAAGGTGCTAAGTTGAGCGAGCAATCGAACAATGAGAG
Clostridium tetani E88
CTC02520 metT -160 104.9 ATTCTTATCAAGAGAGGCGGAGGGACTGGCCCTATGAAACCCGGCAACCAAAAATAATAATTTTAAGGTGCCAATTCCAGCAGGTGAAACCTGACAGATAAGAC
CTC01153 metY -67 105.8 TATCTTATCAAGAGCGGTTGAGGGACTGGCCCTATGAAACCCAGCAACCTATACACAAAGTATAAAGGTGCTAACTCCAGCAGGAAATTTCCTGAAAGATAAGAA
CTC01355 metN -177 79.6 AAGCTTATTAAGAGCGGTGGAGGGACTGGCCCTATGAAGCCCGGCAACCTGTATATGTGTTTGCATATTATAAGGTGCTAAATCCTGCGGTGTAAACCGAGAGATGAGGA
CTC00321 metK -187 99.6 TCTTATCGAGAGAGGTGGAGGGAAAGGGCCCTATGAAACCCGGCAACCAATATTTTTAGAAGTATTAAGGTGCCAATTCCTGCAGAAAGTTCTGCAAGATAAGAGGG
Clostridium acetobutylicum ATCC 824
CAC0390 metI -177 98.8 TCTTATCAAGAGTGACGGAGGGATAGGCCCTATGAAGTCCGGCAACATCCAATTATTTTGGAGATGTGCTAATTCCTACAGGTTTATCCTGAGAGATGAGAATG
CAC0578 metH -181 88.6 AATCTTATCAAGAGTGGTGGAGGGACTGGCCCTTTGAAACCCGGCAACCAGTATATTTTTTAATATATGTGGTGCTAAATCCTGCAGCAAACGCTGATAGATGAGAA
CAC1825 metA -199 83.8 TCTTATCAAGAAGGTGGAGGGACTGGCCCTATGAAGCCTGACAACCGGCAAATGTACGGTGTTAATTCCTGCAAAACTTATTTGTTTTGAAAGATAAGAAAA
CAC0984 metN -182 87.6 ACTTATCAAGAGAGGTGGAGGGACCGGCCCTGTGAAGCCCAGCAACCTGTATATGTTAATTATACAAGGTGCTAATTCCTGCAGCGCTAGCTGAGAGATGAGAATA
CAC2856 metK -179 94.9 ACTCTTATCAAGAGAGGTGGAGGGAAAGGGCCCGTTGAAACCCGGCAACCGATGTATTAATTTAAGTACATAATGGTGCCAATTCCTGCAGAATTATTCTGCAAGATAAGAG
CAC2783 metY -224 93.6 GGTCTTATCAAGAGAGGTGGAGGGACTGGCCCTATGAAACCCAACAACCAGCATTTTTTAATTAGATGTATGGTGTTAATTCCTGCAAAGTTAATTTTGAGAGATAAGAG
Clostridium botulinum A str. ATCC 3502
CBO3402 metT -248 88.4 ATTCTTATCCAGAGCGGCGGAGGGACTGGCCCTATGAAGCCCGGCAACCACTAAGGTGTTTTATTACTTTAAACGGTGCTAATTCCAGCAGGTTAAACCTGGTAGATAAGAT
CBO1621 metF -225 96 ACTTATCAAGAGAGGCGGAGGGACTGGCCCTGTGAAGCCCAGCAACCTATATGAAAGTGAATATAAGGTGCTAAATCCTGCAGCATAAGCTGAGAGATGAGGATA
CBO1876 metY -231 85.3 GCTCTTATCAAGAGTGGTGGAGGGATCAGGCCCTGTGAAGCCCGGCAACAGCTAGTTGAACCTAGAAATGTGCTAATTCCTGCAGTGGATTCACTGAGAGATGAGGG
CBO1084 metN -206 96.9 TCTTATCAAGAGCGGTGGAGGGACTGGCCCTATGAAACCCGGCAACCAGTATATATTTTATACATGGTGCTAAATCCTGCAGATTTAACTGAAAGATGAGAAAA
CBO0168 metK -180 94.7 TCTTATCAAGAGAGGTGGAGGGAAAAGGGCCCTATGAAACCCGGCAACCAGTGATATTCACTAAGGTGCCAATTCCTGCAGTATTATCTGCAAGATAAGAGAG
Clostridium novyi NT
NT01CX_1210 metY -203 99.7 TCTTATCAAGAGTGGTTGAGGGACTGGCCCTATGAAACCCGGCAACAACTAATTTTCATTTAAATTAGTAATGTGCTAATTCCAGCAGGAAATTTTCCTGAAAGATAAGAGGT
NT01CX_0186 metN -181 92.2 AGTCTTATCAAGAGAGGTGGAGGGACTGGCCCTATGAAACCCGGCAACCAGTATACATTTTTAGTGTACAATGGTGCTAAATCCTGCAGTGTAAACTGAAAGATGAGGA
NT01CX_0516 metK -176 95.4 CATCTTATCAAGAGAGGTGGAGGGAATGGCCCTATGAAGCCCGGCAACCAGTATATAAATAAATACTAAGGTGCTAATTCCTGCAGTATAATCTGCAAGATAAGAA
Clostridium perfringens ATCC 13124
CPF_2435 metK -355 92.5 ACTCTTATCCAGAGAGGTGGAGGGAAAAAGGCCCTATGAAACCCGGCAACCAGTGAGAAATCACTACGGTGCCAATTCCGGTAAAGAAATTCTTTACAAGATGAGAG
CPF_2617 metT -264 67.5 ATCTTATCAAGAGAGGTGGAGGGACTGGCCCTGTGAAACCCAGCAACCGGTAATTCTTTGCGGTTAAAACAATGCTAATTTTAAAATGAGAAAAATCAGTAGTAATTTCCCATGCAAAGATTTATAGCGGTGCTAAATCCTGCGGTAGAAACTGAGAGATAAGA
Clostridium difficile 630
CD1825 metY -211 87.3 TCTTATCCAGAGAGGTGGAGGGACTGGCCCTATGAAACCCGGCAACCAGTATATTTATATACATTGGTGCTAAATCCTGCGGCGAAAGCTGAGAGATGAGTATA
CD1166 hom -208 91 TCTTATCAAGAGTGGCAGAGGGACTGGCCCTGTGAAGCCCGGCAACCAGTATATTTAATTATACATTGGTGCTAAATCCTGCAGCATTTATGCTGAAAGATGAGTATA
CD1489 metN -211 91.2 TCTTATCAAGAGTGGTGGAGGGACTGGCCCTTTGAAACCCGGCAACCAGTATATTTTATATACATTGGTGCTAAATCCTGCAACTAATATAGTTGATAGATGAGTATA
CD0130 metK -239 95.6 CCTTATCAAGAGAGGCTGAGGGATAGGCCCTGTGAAGCCCAGCAACCACCCAAATGGGAAAAGGTGCTAATTCCTACAAGACAAAAGTCTTGAAAGATGAGGTCA
CD3598 rhc -183 33.3 ATACTTATCAAGAGTTAGGGGAGAGAGTTAGCTCAGTGATCCTATACCAACCTTTTATCAGGTGGTCCTGCTAACAACGATGAGAT
CD1653 metQ2 -219 90.5 CTTCTTATCCAGAGTGGTGAAGGGACTGGCCCTATGAAACCCAGCAACCAGTATATTTTTATATACATTGGTGCTAAATCCTGCAGTATTATACTGAAAGATGAGTC
Clostridium beijerincki NCIMB 8052
Cbei_0239 metI -254 85.4 TCTTATTAAGAGCGGTGGAGGGACTGGCCCTTTGAAGCCCGGCAACCTGAAAGATTTTATATATAAATTTTTTCGTTGGTGCTAAATCCTGCAAGAGAATATCTTGAAAAATGAGAGGA
Cbei_1401 msd -266 92.7 ACTTATCAAGAGTGGTGGAGGGACTGGCCCGAAGAAACCCAGCAACCGGTAAATTTTATAGAATTACTTGGTGCTAAATCCTGCAGCGTAAGAGCTGGTAGATAAGGTAT
Cbei_0766 metY -312 92.4 TTTTATCAAGAAAGGCGGAGGGACTGGCCCTATGATGCCTAGCAACCTGAATTAAAAACCTATTTTAATTTAAGGTGCTAATTCCTGCAGATATTTTATCTGAAAGATAAGAATG
Cbei_0636 metN -261 84.2 TCTTATCGAGAGCGGTGGAGGGACTGGCCCTTTGAAACCCGGCAACCGAAGTATTATTTTTTACTAAATGATATTTATATGGTGCTAATTCCAGCAGCTTTTAGCTGATAGATGAGAGGA
Cbei_0428 metK -333 88.5 TCTTATCAAGAGAGGTGGAGGGAAAGGGCCCTGTGAAACCCGGCAACCTGTATTATATAAGGTGCCAATTCCTGTAGAGTTTTCTACAAGATAAGAAAA
Clostridium sp. OhILAs
Clos_0544 metQ4 -310 92.2 ACTCTTATCGAGAGCGGTGGAGGGACTGGCCCGTTGAAACCCGGCAACCACGACATTTGTCGAAGGTGCTAATTCCAGCAACATTTTTGTGTTGAGAGATGAGAG
Clos_0078 metF -274 89.3 TTTTATCGAGAGAGGTGGAGGGAAAGGCCCTATGAAACCTCGGCAACCTGCAAACGTATTTGTTTGAAAAGGTGCCAATTCCTACTCTAAGTGAACTTAGAGAGAGATAAGAGGG
Clos_2186 hom -492 30.7 ATCTTTATCCAGAGTGGTGGAAGAACTTAGTCCTGCTAAACTTGACAATGGGTAGCAATACACGGTGTTAATTCCAACAAAGCAAAGGCTTTGAACATAAGAG
Clos_2531 metK -367 90 TGCCTTATCAAGAGCGGTGGAGGGATAGGCCCTATGAAACCCGGCAACCATAGTGTGAATACACGTTTGGTGCTAAATCCTACAGAATATTTATTCTGAAAGATGAGGA
Clos_0078 metF -450 93.4 ACTTATCAAGAGAGGTGGAGGGAAAGGCCCTATGAAACCCAGCAACCTATATGCTTATCTGCATATAAGGTGCTAAATCCTACAGCATAGGCTGAGAGATAAGAATT
Clostridium sp. L2-50
CLOL250_01292 metK -278 44 GCTCTTATTCAGAATGGTGGAGTCATAAGGGACTGTGAAGCCATGGCAACCCCGGAACAGGTGAAAGAAATACCTGTATGGAAGGTGCCTTCCTGAGCGAGTCTGTAATATGCAGACGTCGAACAATGAGAG
Clostridium scindens ATCC 35704
CLOSCI_00966 metK -263 57.2 TCTCTTATTCAGAGCAGTGGAGATACAAAGGATCTATGAAGCTGCGGCAACCCCCGGCGCGTGGAAGGTGCCAACCTGAGCGAGTAATCGAACAATAAGAG
Clostridium nexile DSM 1787
CLONEX_00524 metK -212 63.7 TCTTATTCAGAGTGGTGGAGGTAAAAGGATCTATGAAGCCACGGCAACCCCGGGAACGGAAGGTGCCAACCTGAGCGAGTAATCGAACAATAAGAGGA
Clostridium leptum DSM 753
CLOLEP_01532 metK -35 79.8 CCTTATCAAGAGAGGCGGAGGGAACAGACCCTGTGATGCCCGGCAACCTGCGGTTTGCAAGGTGCCAATTTCTGCGGGAAAACCGGAAGATGAGGTTA
Clostridium hiranonis DSM 13275
CLOHIR_02203 rhc -167 20.7 ACTTATCAAGAATCGGGGCAGAGGGTCAGCTCGTATCCCGATACCAACCTAAATTTAAAGGTGGTCCTGCTGACATCGATAAGATAG
CLOHIR_00307 metN -203 87.5 TCTTATCAAGAGAGGTGGAGGGACTGGCCCTGTGAAACCCGGCAACCGGTATATTTCAATATATACAGCGGTGCTAAATCCTGCAACTAGTAATAATCAGTTGATAGATGAGTATA
CLOHIR_00024 metK -292 96.8 CCTTATCAAGAGAGGCTGAGGGACAGGCCCGATGAAGCCCGGCAACCACCCATAAGGGAAAAGGTGCTAATTCCTACAGGATTTATCCTGAAAGATGAGGTTA
Clostridium butyricum 5521
CBY_2058 metQ5 -337 90 CAACTTATCAAGAGTGGTGGAGGGACTGGCCCTATGAAACCCGGCAACCGACATTTAGTTCATTTACTATATGTGACGGTGCTAATTCCTGCAGTTTATTTAAACTGGTAGATGAGAG
CBY_0038 msd -289 91.2 ACTTATCAAGAGTGGTGGAGGGACTGGCCCTGTGAAACCCGGCAACCAATATTTATTAGATGATATGAGGTGCCAAATCCTGCAGTTTTTATGACTGGTAGATAAGGTAA
CBY_1316 metK -295 91.1 TCTTATCAAGAGAGGTGGAGGGATAGGGCCCAGTGAAACCCGGCAACCTGTATATACAAGGTGCCAATTCCTGTAGATGTAATTCTACAAGATAAGAAAA
CBY_4078 metY -317 79.6 TTTTATCAAGAAAGACGGAGGGACTGGCCCTGTGATGTCTGGCAACCTGGAGGATATATCATATATATATTGTTTAAGGTGCTAATTCCTGCAGATTTTATATCTGAGAGATAAGAAGA
Clostridium bolteae ATCC BAA-613
CLOBOL_06841 metK -215 46 TCCCTTATTCAGAGTGATGGAGGTACAAAGGACCTGTGAAGTCACGGCAACCCCGGTTGAGTATATCAGCAAGATATGCGAAAGGGCCGGAAGGTGCCAGCCTGAGCGAGGAGTATGCTATGGAGCATACTTGGTCGAGCAATAAGAG
Clostridium bartlettii DSM 16795
CLOBAR_01632 metQ2 -218 93.9 AGTCTTATCAAGAGCGGTGGAGGGACTGGCCCTGTGAAACCCAGCAACCAATATATCTATATATGGTGCTAAATCCTGCAGCATTATGCTGAAAGATAAGTA
CLOBAR_02816 metY -257 84.3 ATTCTTATCAAGAGAGATGGAGGGAATAGGCCCAGTGAAGTCCAGCAACCTATAATTAGATAGGTGCTAAATCCTACTTATGTTTTCATAAGAAAGATAAGAG
CLOBAR_00998 metN -277 95.9 ACTCTTATCAAGAGTGGTGGAGGGACTGGCCCTGTGAAACCCAGCAACCAATATTTTTAATATATGGTGCTAAATCCTGCAACTTTTTTAGTTGAAAGATGAGTA
CLOBAR_00743 metK -303 97.8 TACCTTATCAAGAGAGGCTGAGGGACAGGCCCTATGAAGCCCAGCAACCACTTGGAAAAGGAAGGTGCTAAATCCTGCTAGAGAGAATTCTAGAAAGATGAGGT
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