Profile of regulator VanR in Comamonadaceae
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Vanillate utilization |
| Effector: | Vanillate |
| Regulog: | VanR - Comamonadaceae |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By trascription factor - VanR
- By TF family - GntR/Others
- By effector - Vanillate
- By pathway - Vanillate utilization
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Comamonas testosteroni KF-1 | |||||
| CtesDRAFT_3110 | vanR | -46 | 4.9 | TGTATACA | |
| CtesDRAFT_3110 | vanR | -111 | 4.9 | TGTATACA | |
| CtesDRAFT_4801 | CtesDRAFT_4801 | -150 | 4.1 | TGTTTACA | |
| Delftia acidovorans SPH-1 | |||||
| Daci_1351 | vanR | -101 | 4.9 | TGTATACA | |
| Daci_1351 | vanR | -37 | 4.9 | TGTATACA | |
| Daci_1351 | vanR | -142 | 4.9 | TGTATACA | |
| Polaromonas naphthalenivorans CJ2 | |||||
| Pnap_2731 | vanR | -137 | 4.9 | TGTATACA | |
| Pnap_2731 | vanR | -201 | 4.1 | TGAATACA | |
| Polaromonas sp. JS666 | |||||
| Bpro_3387 | vanA | -18 | 4.9 | TGTATACA | |
| Bpro_3387 | vanA | -81 | 4.1 | TGAATACA | |
| Variovorax paradoxus S110 | |||||
| Vapar_1746 | vanR | -103 | 4.1 | TGTGTACA | |
| Vapar_1746 | vanR | -38 | 4.9 | TGTATACA | |
| Verminephrobacter eiseniae EF01-2 | |||||
| Veis_1485 | vanA | -82 | 4.1 | TGTGTACA | |
| Veis_1485 | vanA | 1 | 4.1 | TGTATCCA | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |