Profile of regulator VanR in Oceanospirillales/Alteromonadales
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Vanillate utilization |
| Effector: | Vanillate |
| Regulog: | VanR - Oceanospirillales/Alteromonadales |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - VanR
- By TF family - GntR/Others
- By effector - Vanillate
- By pathway - Vanillate utilization
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Marinomonas sp. MWYL1 | |||||
| Mmwyl1_1295 | vanR | -195 | 5.5 | ATTGGATCCAAT | |
| Mmwyl1_1295 | vanR | -143 | 5.4 | ATTGGATCCATT | |
| Mmwyl1_1295 | vanR | -134 | 3.7 | ATTTGATGCATA | |
| Mmwyl1_1295 | vanR | -74 | 5.5 | ATTGGATCCAAT | |
| Mmwyl1_1296 | vanA | -161 | 5.5 | ATTGGATCCAAT | |
| Mmwyl1_1296 | vanA | -101 | 3.7 | TATGCATCAAAT | |
| Mmwyl1_1296 | vanA | -92 | 5.4 | AATGGATCCAAT | |
| Mmwyl1_1296 | vanA | -40 | 5.5 | ATTGGATCCAAT | |
| Chromohalobacter salexigens DSM 3043 | |||||
| Csal_0344 | vanA | -47 | 5 | TTTGGATCCAAA | |
| Csal_0344 | vanA | -99 | 4.9 | TTTGGATCCAAC | |
| Csal_0345 | vanR | -91 | 5 | TTTGGATCCAAA | |
| Csal_0345 | vanR | -39 | 4.6 | GTTGGATCCAAA | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |