Profile of regulator VanR in Alteromonadales
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Vanillate utilization |
| Effector: | Vanillate |
| Regulog: | VanR - Alteromonadales |
Member of regulog collections
- By taxonomy - Alteromonadales
- By trascription factor - VanR
- By TF family - GntR/Others
- By effector - Vanillate
- By pathway - Vanillate utilization
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Pseudoalteromonas atlantica T6c | |||||
| Patl_0858 | Patl_0858 | -200 | 5.3 | TTTGGATCCAAT | |
| Patl_0858 | Patl_0858 | -164 | 3.8 | TTTGGCTGCAAT | |
| Patl_0852 | null | -260 | 3.8 | CTTCGATCCAAC | |
| Patl_0845 | vanR | -242 | 4.7 | GTTGGATCCATT | |
| Patl_0844 | vanA | -85 | 5.5 | ATTGGATCCAAT | |
| Patl_0844 | vanA | -32 | 5.1 | AATGGATCCAAC | |
| Patl_0852 | null | -63 | 3.7 | TATTCATCCAAT | |
| Patl_0867 | null | -1 | 4.3 | TATGTATCCATT | |
| Patl_0869 | vanB | -94 | 3.6 | TGTGGATGCAGT | |
| Patl_0845 | vanR | -72 | 5.5 | ATTGGATCCAAT | |
| Patl_0844 | vanA | -202 | 5.5 | ATTGGATCCAAT | |
| Patl_0845 | vanR | -189 | 5.5 | ATTGGATCCAAT | |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |