Profile of regulator RutR in Pseudomonadaceae
Properties
| Regulator family: |
TetR |
| Regulation mode: |
repressor |
| Biological process: |
Pyrimidine utilization |
| Effector: |
Uracil |
| Regulog: |
RutR - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA1517 |
COG0726 |
-157 |
6 |
AACTGACCAGTCGGGCAGGT |
|
PA0166 |
pbuT |
-77 |
5.3 |
AGCTGATCACCTGGACAGCT |
|
PA0165 |
tsx |
-62 |
5.8 |
GCCTGACCGCTCGGACAGGT |
|
PA0136 |
ppuA |
-65 |
5.4 |
TCCTGACCTCCTGGCCAGGT |
|
Pseudomonas entomophila L48
|
|
PSEEN1759 |
pbuT3 |
-121 |
4.7 |
TCCTGACCCAGAAGTCAACA |
|
PSEEN1685 |
COG0726 |
-179 |
6 |
AACTGACCAATCGGGCAAGT |
|
PSEEN1679 |
tsx |
-349 |
5.3 |
ACCTGACCGAACGCCCAACT |
|
PSEEN1679 |
tsx |
-71 |
5.2 |
AGCTGACCCAAAAGACAAGA |
|
PSEEN1679 |
tsx |
-229 |
5.2 |
TACTGACCGCTCAGTCAATG |
|
Pseudomonas putida KT2440
|
|
PP4286 |
COG0726 |
-189 |
6 |
AGCTGACCAAACAGGCAGGT |
|
PP4293 |
tsx |
-231 |
5.2 |
TACTGACCGCTCAGTCAATG |
|
Pseudomonas syringae pv. tomato str. DC3000
|
|
PSPTO3671 |
tsx |
-98 |
5.4 |
AGCTGACCAGACAGACAAAA |
|
PSPTO3666 |
COG0726 |
-169 |
6 |
AACTGACCAGTCAGGCAGGT |
|
PSPTO0772 |
pbuT |
-83 |
5.1 |
ACCTGAGCAGGTGGACAGTT |
|
PSPTO0769 |
ppuA |
-64 |
5.6 |
ACCTGACCCATTGGCCAGGA |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_4366 |
COG0726 |
-189 |
5.7 |
AGCTGACCATCCAGGCAAGT |
|
PFL_0731 |
pbuT |
-22 |
5.3 |
ACCTGAGCACCTGGACAGCT |
|
PFL_4372 |
tsx |
-253 |
5.4 |
ACCTGACCCAAGAGCCAACT |
|
PFL_0728 |
ppuA |
-22 |
5.4 |
TCCTGACCCACTGGCCAGGA |
|
Pseudomonas mendocina ymp
|
|
Pmen_2756 |
pbuT3 |
-123 |
4.8 |
TCTTGACCGCTCGGTCAACA |
|
Pmen_2758 |
COG0726 |
-166 |
5.8 |
TGCTGACCACTCAGGCAATT |
|
Pmen_3697 |
tsx3 |
-92 |
5.4 |
AGCTGATCAGTTGGACAGCT |
|
Pmen_3697 |
tsx3 |
-54 |
5.7 |
ACCTGACCACACGGCCAGGA |
|
Pmen_4444 |
pbuT4 |
-36 |
5.6 |
GCCTGACCAATCGGACAACA |
|
Pmen_2762 |
pbuT2 |
-100 |
5.5 |
TTCTGACCGACCAGACAGCT |
|
Pseudomonas stutzeri A1501
|
|
PST_3175 |
upp |
-159 |
5.3 |
ACCTGACCGAACAGACTACT |
|
PST_2862 |
tsx |
-58 |
5.5 |
GCCTGACCGCTTGGACAACT |
|
PST_2862 |
tsx |
-224 |
5.1 |
AGCTGACGCATCGGTCAGGT |
|
PST_3090 |
pbuT3 |
-63 |
5.1 |
TCCTGACCTTTCGGTCAACT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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