Profile of regulator T-box(Asp) in Lactobacillaceae

Properties
Regulator family:	RF00230
Regulation mode:
Biological process:	Amino acid metabolism
Effector:	Asp-tRNA
Regulog:	T-box(Asp) - Lactobacillaceae

Member of regulog collections

By taxonomy - Lactobacillaceae
By RNA motif - T-box
By effector - Asp-tRNA
By pathway - Amino acid metabolism

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Lactobacillus reuteri JCM 1112
	LAR_1731	hisS	-281	67.8	TATAAAAGCATTGACGTAGAAACAAAGTGCCTGTGTAATTGACAGAGACCCAGTTGAGCTGAGAGCTGGGAGCAGACATGATCCACCTCTACTAGCTGAAAGGATGAATTTTAGTAGTCTGTTCCGGTGATTCCGTTATCATCAGGAGTTAACGCAACTCCATGAGGCAGTGACTGTGAGGTTACTGTAAAATAGAGGTGGAACAGTGATGAATATCGCCCTCTAA
	LAR_0695	aspS	-233	50.6	AATAGCTGTTGATAAAGAATGCTCGGGTACTTGAAATTATCAGCGATTGGAGAAAGGTGAGAGCTCCAAATATTTCAGCCTCGATTGACCCTTTTGAAGCTGGGCAATATGCTCCGTCGTTTAGACGTTATTTTTGAGTGATACCAAGGTGGTACCGTGCATTTGCACCCTTGTAAT
Lactobacillus helveticus DPC 4571
	lhv_1013	hisS	-236	37.4	AATTATCGATGACAAAGAATGAAGATTAGCAATGATCTATTGAAAGAGACTGCTTGTGTTGGTGAGAGAGCAGATAGATCGCAGTCTGTGACACCTTTACCAGATAATGGATCGTTTTGCGAGCGTTAATCGTAGTAACCAATAAGGTGGTACCGTGCTAATATAAGCGCCCTTGATTT
Lactobacillus fermentum IFO 3956
	LAF_0832	hisS	-221	52	GACTGTCAATGAAAAAGAATGATCAACTGGCCCGGGATAGCGAGTGGGTGGTGGTGCAAGACCCACCGGTGCGCTGGTTGAGTGACCCTTTGGAGACTGGGCGTTTGCCCCGCTGAGTATTCGGCGTTACCCACGAGTTGATACCAAGGTGGTACCGTGCATTTTGCACCCTTGTCTT
Lactobacillus salivarius subsp. salivarius UCC118
	LSL_0852	hisS	-243	76.3	TAAAGCCGAATGAAAGAAGAGTATCTAAACAATCGTTGACAGAGAATGGATGATTGGTGAAAATTCCAGCTATGATTTTTAGAGAAAGACACTTTTTAGGTATATATGTAATGTATATCGTTAGCCGCGTTAACGCTAGAGAGCATAAAATCAAGGTGGTACCGTGCAACTAGCACCCTTGTTGT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
	LBUL_0812	hisS	-230	37.8	AATTATCAATGACAAAGAATGAAGATAGCCCGGCCTTTTTAGAGATTGCCCGTTTGGTGAAAGAGCAGATGGCTGCTAGCTGTGACCCTTTAGCAGATAATGGTTCGTTTCGTCAGCGTTAATGACAGCAAACAAAAGGTGGTACCGTGCTGTTTTCAAGCGCCCTTGATTA
Lactobacillus acidophilus NCFM
	LBA0935	hisS	-236	37.8	AATTATCGATGACGAAGAATGAAGATTAGCAAGATCTATTTGAAGAGACTGTCAGGTTGGTGAGATGGCAGATAGATCGCGGTCTGTGACACCTTTAGCAGATAATGGTTCGTTTGGCGAGCGTTAATCGCAGCAACCAAAAAGGTGGTACCGTGCTAATGTAAGCGCCCTTGAATT
Lactobacillus johnsonii NCC 533
	LJ1392	hisS	-222	40.3	GGAATTATCGATGACGAAGAATGTAGATTAGCATGATCTATCTCAGAGACCGCTTGTTTGGTGAGAATAGCGGATAGGTTGCGATCTGTGACACCTTTAGCAGATAATGGATCGTTTCGCGAGCGTTAATCGCAGCAAGCAAAAGGTGGTACCGTGCTAATTTATTGCGCCCTTGAC
	LJ0753	glnQ	-386	84.7	AAAAAGCGATAAAAAGAAAAGTAGGTAATCTATTTCTTTTAGTGAGTTAACGGTAGTGGAAAAGTTAGCAGACCCTGGATTATTGAAAGACACTTTTATAATGCTGCTGGCCGAAATCTTTTAAGAGAGTAAGTTTAGCCGTAAGCGGTACGTTATCTAGCCGCTGGAGCATGGTTGTGCTCTAGTCAAGTTGGTCTTTAATTAGACAATTTAGGTGGTACCGCGGAAAAAAGCCTTTCGTCCTGAGTAA
Lactobacillus plantarum WCFS1
	lp_1981	hisS	-238	48	CAATCGACCGCAGAGAAAGTAAGAGCATTGTACGCCACTATAACCAGAGACCGGTAAGTGCTGAGAATTCCGGATAGTGCGCAATGAGGAGACGCTTTTGAGGTGAACGGCAGCGTTCCGCCTGTGATTACAGACGTTATCAATTAGTACTCAAAAAGGTGGTACCGCGCTAATAGCGCCCTTGGT
Lactobacillus casei ATCC 334
	LSEI_1527	hisS	-361	50.9	ACTAAGACCTGTGACGAAGTAGGATAGATCACTTTAAGCGACCCGGAGATGGTGAAAGCCGGGAACGATCGAAAAGACACTTCTGAGGTGAACAAGTTCCGGAACGCCACCGTTATGGCAAAGAAAAAAACAAGGTGGTACCGTGTCCGCACCCTTCGA
Lactobacillus brevis ATCC 367
	LVIS_0735	hisS	-238	63.9	GATTGCCAAAGAGAAAGACTAGTAAGGCCTACCCCGCTGACAGAGACGTCAACTTGCTGAAAATGACGAACGGGCGCAACTTGAAGACACTTTTGAGGCTAATGGTGGCAGTAGCGACCATTCGTTTGCAACGTTATCCTGCAGAAAATATAAAAGGTGGTACCGTGCATACCTGCGCCCTTGTCAA
Lactobacillus sakei subsp. sakei 23K
	LSA0863	hisS	-227	52.2	GATGACCAGTGATAAAGTATGGTAAACGCACCACTTAACAGAGACGATTTCAAAGCTGAAAGAAATTGACGGTGTCCACCTGACTGCTTTTGAGGTCTGCGTGTCTAACACGCCGTTGGCTAACAACGTTATGCTTAAGCAAAAATTAAGGTGGTACCGTGCATTCAAGCACCCTTGTTCA
Pediococcus pentosaceus ATCC 25745
	PEPE_1116	hisS	-223	84.8	ATATAAATCGATGAAAAGGACTATTAAATATTGACGACATGGCTAAGAGAGCTCGGTTGCTGGAAAAGAGTGCATGCGTCATATTGAAGACACCTTGGAGATTTGGTCGGCACCCATTATATATGCCGTAGAGTACAAATCTAAGGTGGTACCGCGTCAAGACGCCCTTGTT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
	LEUM_1310	hisS	-363	74.3	ATTAGAACCGATGAATTGGAAAAATTACCGTCTGGACATGAAGAAATTTTGCGGAAGATGCGAGCAAAACAAAGACGTAATTTTGGACACCTTGGAGGTTGCTATTGATCAAGATAGCTCGTGGTTGCGCGTTAAGCAATTAAAGTAACATGAAAATGTTAAAATCTAAGGTGGTACCGTGCATTTGCGCCCTTAAC
Lactobacillus rhamnosus GG
	LGG_01562	hisS	-438	47.1	ACTAAGACCTGTGACGGAGTAGGATAGATCAATTTTAAGCGACCCGGAGATGGTGAAAGCCGGGACCGATCGAAAAGACACTCCTGAGGTGATCAAGTTCCGGAACGCCACCGTTATGGCAAAGTAAAACACAAGGTGGTACCGTGTCCGCACCCTTCGA

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Profile of regulator T-box(Asp) in Lactobacillaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --