Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator TPP in Lactobacillaceae

Properties
Regulator family: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Lactobacillaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Oenococcus oeni PSU-1
OEOE_1491 ykoE -251 65 ACATCAAAATCTGGGGTGCCCAAGGGCTGAGACTATACCCACATAACCTGATCTAGTTCGTACTAGCGTAGGGAGATTACTTGAGAGATTT
OEOE_0174 ykoE -151 67.3 ATACTTCTATCTGGGGTGCCTTTACTTTTAAGGCTGAGATTTACCCATCGAACCTGTAGGTTAATACCTGCGTAGGGAGATAGCGAAAAGAGTCG
Lactobacillus reuteri JCM 1112
LAR_1494 cytX -182 59.3 TTGCATAAACGGGGAGCTTGCAGACAGGCTGAGAGGGGACTATGCGTCTCGACCCAATGAACCTGATTTGGATAATGCCAACGTAGGAAGGATTAATAAAGGACGACCAG
LAR_1550 ykoE -156 71.9 GAATAAATCTGGGGTGCCAAACGGCTGAGATAATACCCATTGAACCTGCTCTGGTTAATACCAGCGAAGGGAGATTCAGTGATATTAACTT
LAR_0968 thiM -162 54.3 TATTGCATTAGGGGTGCCCATAGTGCTGGGCTGAGATGTGCAGAGACGCATGGACTCTAGAACCTGTAAGTTAACGCTTGCGTAGGAAAATGCACCGAACTTTAATA
Lactobacillus fermentum IFO 3956
LAF_1533 ykoE -300 74.3 CAGAATCTGTCTGGGGTGCTATTGACTTAGCTGAGAAATACCCATTGAACCTGATCTAGTTAATACTAGCGGAGGAAGACAGTTGAATCAACGG
LAF_0803 thiM -282 62 TAATAGTTGCTAGGGGTGTCGGACCACCGACTGAGACGCCAATTGGCGGACCCTTTGAACCTGGGAGTTTGGACTCGCGGAGGGAAGCAACGGTCGGCGAAA
LAF_1705 ykoE -168 57.7 TATCTTGTCTGGGGTGCCATTGGCTGAGAAATACCCATTGAACCTGCTTTGGTTAGGACCAACGAAGGGAACGACAGGTAATCACCGTCAA
Lactobacillus salivarius subsp. salivarius UCC118
LSL_1668 thiT -175 65.9 ACTAGCACAAGGGGAGCCTTTTTGGCTGAGAGTGAAGTTATTCAGACCCTTTGAACCTGTTCGTTAATGCGAGCGTAGGAATGTGTAGTAAATCAGATAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
LBUL_0454 ykoE -167 60.9 AAAGCCACTAGGGGAGCGAAAGCTGAGATGACGAAAGTCGACCCTTTGAACCTGACCAAGGTAATTCTTGCGCAAGGGAAGTGTTTCTTAAACATGAT
LBUL_0126 ykoD -118 37.8 GACGAATCAACGGGGTGCCGGAAGGCTGAGATGATACCCATGGAACCTGGCCAGGTAATGCTGGCAAGGGAAAATGCTGCTGCTTATGG
Lactobacillus acidophilus NCFM
LBA0576 ykoE -140 63 TAAGTCACTAGGGGTGCTGAAAAGCTGAGATATACCCTTCGAACTTGAACAAGGTAATGCTTGCGATAAGGAAAGTGCTAATTATAGATCTT
Lactobacillus johnsonii NCC 533
LJ0074 ykoE -142 59.4 GTAAATACATCTGGGGTGCCTATCGGGCTGAGAATATACCCATTGAACCTGTTTGATTAATATCAGCGTAGGGAAAATGACTATTTTTAGAC
Lactobacillus plantarum WCFS1
lp_0219 ykoE -197 58.1 TTCATAGCAACTGGGGTGCCATCACGGCTGAGATAATACCCATTGAACCTGAATCTGGACAATGCCAGCGCAGGGAGCAATGCTTTTATTTGGGG
lp_0113 thiM -183 67.4 TTAAACACTAGGGGTGTCCAAAAATGGGCTGAGATGGTGCTGTAAGTACCGATCCCTTTGAACCTGTAAGCTCAAACTTGCGTAGGAAAGTGTCACAGCTAATGTTA
Lactobacillus casei ATCC 334
LSEI_1757 thiT -141 61.4 AACCTTCACAAAGGGGAGCCATTGGCTGAGAACGGGGAAACCCGGACCCTTCGAACCTGTTCGTTAATGCGAGCGTAGGGATTTGTGAATGGTCGGAAG
LSEI_0294 ykoE -245 68.2 AGAAACATTTGGGGTGCTGTAAAGCTGAGATGATACCCATGGAACCTGATGCAGTTAGGACTGCCGCAGGGAAATGTCGAAGAAGTGAATC
Lactobacillus brevis ATCC 367
LVIS_2099 thiM -334 64.3 ACCAAAACACTAGGGGTGTCCACAAATGGGCTGAGATATGGCAACGCCATGATCCCTTAGAACCTGTCAAGTTCAGACTTGCGGAGGGAACGTGTCGTGGCACCCAA
LVIS_1827 ykoE -180 58.1 ACATATGACTGGGGTGCCACTATGGCTGAGATTAAACCCATTGAACCTGCTCTGGTTAGGACCAGCGAAGGGAACGCGTCTAATTTAGACTTA
Lactobacillus sakei subsp. sakei 23K
LSA0968 thiT -146 57 CCATCGCAAAGGGGAGCCATTGGCTGAGAGTGATTAGATGATCAGACCCTTCGAACCTGTTTGTTAAGACAAGCGTAGGAATTGTGATGGAGTTGAGACT
LSA1095 tenA -203 60.9 AATAACGCATCTGGGGTGCCTAAGAGCTGAGATTATACCCATTGAACCTGATATAGTTAGTACTAGCGCAGGGAAATGTCGTGTCGTTTGT
LSA0059 thiM -178 69.4 CGCTTTGCACTAGGGGTGTTCTTAGAAGAACTGAGATAGGTTTGTACAACCTGATCCCTTTGAACCTGTAAGTTCAGACTTGCGTAGGAAAGTGCCTTTCTCTATTA
Pediococcus pentosaceus ATCC 25745
PEPE_0333 thiX -465 55 GATTTTGTAACAGGGGTGCTGGGCTTTACCTGGCTGAGATTAAAACTAAATGGTTTTTGACCCTCGAACCTGATATGGATAATGCCAGCGCAGGAAGACTCAATTGTAATATT
PEPE_0558 thiM -185 66.6 ATCTGCACTAGGGGTGTTCTTAGAAGAACTGAGATACGCTTGTTCAGCGTGATCCCTTTGAACCTGTAAGTTAGTACTTGCGAAGGAAAGTGTTTAATTGTTGAAAC
PEPE_0334 null -206 55 GATTTTGTAACAGGGGTGCTGGGCTTTACCTGGCTGAGATTAAAACTAAATGGTTTTTGACCCTCGAACCTGATATGGATAATGCCAGCGCAGGAAGACTCAATTGTAATATT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
LEUM_1455 null -218 64.8 ATTAACATACTAGGGGTGCTTTTAAAAAAGCTGAGAGAGAAGAGATAATCTTTGAACCCTTTGAACCTGATCTGTAGCAAGCAGCGTAGGAAAGTATGAATATATGATT
LEUM_0981 null -176 63 TAAATAACTAGGGGCGCCAATTGGCTGAGAAGAACCCTTTGAACCTGAGATGGATAATGCCAGCGGAGGAAAGTGAATTGTGTGATGCAA
LEUM_0933 null -349 65.3 GCTTGTGCTAGGGGCGCCAAAATGGCTGAGAAGAACCCTTCGAACCTGAACTGATTAACATCAGCGTAGGAAAGTGCTACATTTTTTAACG
LEUM_0933 null -177 79.9 ATAATCACTAGGGGCGTCGCAAAGACTGAGATGATGTATATCGGTCCCTTTGAACCTGATCTAGTTAATACTAGCGTAGGAAAGTGACCAATATTTGATAA
LEUM_1545 ykoE -213 60.5 AATATTTTATCTGGGGTACCGTAAGGTTGAGATAATACCCATTGAACCTGTCAGGTTAATACCTGCGAAGGAAGAATAAGTTAGATTAAGA
LEUM_1159 thiE -223 64.2 ATATGTATGTCTGGGGTGCCCGCGAGGGCTGAGAAATACCCATTGAACCTGATCGGATTAAAATCTGCGTAGGAAGATGTGATTAATAGATT
LEUM_0769 ykoE -409 65.9 ACACCAAAATCTGGGGTGCCGTCGCGCTGAGATAAAACCCATCACACCTGATCTAGTTAATACTAGCGTAGGGAGATTTACTTGAAAATGT
LEUM_0485 thiM -234 60 ATAAATATCTGGGGTGCCCAAGCTGGCTGAGAGATACCCATTGAACCTGATTACGGTAATTCGTGCGAAGGAAGATTATAATAATGAACTAT
LEUM_1546 tenA -176 79.2 CTGTCCACTAGGGGTGCCTTCTTGGCTGAGATGATATTACTTATCAATCCCTTCGAACCTGATCTAGTCAATACTAGCGTAGGAAAGTGGTATTCTTTTTACAA
Lactobacillus rhamnosus GG
LGG_01815 thiT -140 57.5 AACCTTCACAAAGGGGAGCCATTGGCTGAGAGCGGGGAGACCCGGACCCTTCGAACCTGTTCGTTAGTGCGAGCGTAGGGATTTGTGAATGTCGGAAAC
LGG_00363 ykoE -289 71 AGAAACATTTGGGGTGCTGAAAAGCTGAGATAATACCCATGGAACCTGATGCAGTTAGTACTGCCGCAGGGAAATGTCGCTAAGATCAATC
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