Profile of regulator IscR in Comamonadaceae
Properties
| Regulator family: |
Rrf2 |
| Regulation mode: |
activator (repressor) |
| Biological process: |
Iron-sulfur cluster biogenesis |
| Effector: |
Iron-sulfur cluster redox state |
| Regulog: |
IscR - Comamonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Acidovorax avenae subsp. citrulli AAC00-1
|
|
Aave_2442 |
iscR |
-207 |
5.7 |
TTACCCGACAAAAACAATAGGGTTT |
|
Aave_2442 |
iscR |
-176 |
5.4 |
ATACTTGGGCGCAACACTCAAGAAA |
|
Acidovorax sp. JS42
|
|
Ajs_2145 |
iscR |
-189 |
5.6 |
TTACCCGATAAAATTAATAGGGATT |
|
Ajs_2145 |
iscR |
-158 |
5.8 |
ATACTTGTCTCAAATACTCAAGAAA |
|
Comamonas testosteroni KF-1
|
|
CtesDRAFT_1260 |
iscR |
-182 |
5.8 |
TTACCCGACAAAATTGATGGGGAAT |
|
CtesDRAFT_1260 |
iscR |
-152 |
5.6 |
ATACTCGCGTCAAACACTCAACAAC |
|
Delftia acidovorans SPH-1
|
|
Daci_4000 |
iscR |
-192 |
5.8 |
TTACCCGACAAAATTGATGGGGAAT |
|
Polaromonas naphthalenivorans CJ2
|
|
Pnap_2291 |
iscR |
-152 |
6.3 |
ATACTTGACGAAATTAGTCAAGAAC |
|
Polaromonas sp. JS666
|
|
Bpro_2177 |
iscR |
-154 |
6.3 |
ATACTTGACGAAAACAGTCAGGAAC |
|
Rhodoferax ferrireducens DSM 15236
|
|
Rfer_2176 |
iscR |
-52 |
5.6 |
ATACTCAACTATATTAGTCAAGTAA |
|
Rfer_2176 |
iscR |
-82 |
5.2 |
TTACCCGAGTAAATTACTTGGTTTC |
|
Variovorax paradoxus S110
|
|
Vapar_2141 |
iscR |
-165 |
5.9 |
ATACTTGAGCGAAATACTCAACAAC |
|
Vapar_2141 |
iscR |
-152 |
5.4 |
ATACTCAACAACAACAAAAAAGAAC |
|
Verminephrobacter eiseniae EF01-2
|
|
Veis_2372 |
iscR |
-216 |
4.2 |
TAATCCGACAAATTTGATAAGGATT |
|
Methylibium petroleiphilum PM1
|
|
Mpe_A2263 |
iscR |
-98 |
5.1 |
ATAATTGAGCTATTCAGTCGGGATT |
|
Leptothrix cholodnii SP-6
|
|
Lcho_1048 |
iscR |
-109 |
6.1 |
ATAATCGAGTAAAACACTCGGGAAA |
Export
|
Regulatory Sites
|
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