Regulon of FadP in Ralstonia eutropha H16

Properties
Regulator type:	Transcription factor
TF locus tag:	H16_A0459
Regulator family:	TetR
Regulation mode:
Biological process:	Fatty acid degradation
Effector:
Regulog:	FadP - Ralstonia
Statistics of regulated genes:
- Genes	36
- Operons	15
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 85 sites [see more]

Member of regulog collections

By trascription factor - FadP
By taxonomy - Ralstonia
By TF family - TetR
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -248 Score: 5.1 Sequence: AAGAACGACCGTTCCA Locus tag: H16_A1324 Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
	H16_A1324	etfD	Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -98 Score: 5.5 Sequence: TAGTACGATCGTTCGA Locus tag: H16_A0814 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: H16_A0815 Name: etfA Funciton: Electron transfer flavoprotein alpha subunit Locus tag: H16_A0816 Name: acdH2 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	H16_A0814	etfB	Electron transfer flavoprotein, beta subunit
	H16_A0815	etfA	Electron transfer flavoprotein alpha subunit
	H16_A0816	acdH2	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -143 Score: 4.9 Sequence: CTGAACGACCGTTCTT Locus tag: H16_A0459 Name: fadP Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family Locus tag: H16_A0460 Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) Locus tag: H16_A0461 Name: acdB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Locus tag: H16_A0462 Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Locus tag: H16_A0463 Name: degV Funciton: conserved hypothetical protein, DegV family Locus tag: H16_A0464 Name: echH Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	H16_A0459	fadP	Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
	H16_A0460	acdH	Acyl-CoA dehydrogenase (EC 1.3.99.3)
	H16_A0461	acdB	Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
	H16_A0462	acdA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	H16_A0463	degV	conserved hypothetical protein, DegV family
	H16_A0464	echH	Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -74 Score: 5.4 Sequence: TAGAACGATCGTTCGG Locus tag: H16_A2794 Name: fadD2 Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	H16_A2794	fadD2	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -97 Score: 5.3 Sequence: TCGAACGATCGTTCAC Locus tag: H16_A1554 Name: RSc1772 Funciton: Alpha/beta hydrolase fold-3 domain protein Locus tag: H16_A1555 Name: h16_A1555 Funciton: conserved hypothetical protein, UPF0065 Locus tag: H16_A1556 Name: Rsc1773 Funciton: putative 4-hydroxybenzoyl-CoA thioesterase
	H16_A1554	RSc1772	Alpha/beta hydrolase fold-3 domain protein
	H16_A1555	h16_A1555	conserved hypothetical protein, UPF0065
	H16_A1556	Rsc1773	putative 4-hydroxybenzoyl-CoA thioesterase
Position: -214 Score: 5.5 Sequence: TTGAACGACCGTGCTA Locus tag: H16_A1526 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Locus tag: H16_A1527 Name: pncA Funciton: Nicotinamidase (EC 3.5.1.19) Locus tag: H16_A1528 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) Locus tag: H16_A1529 Name: paaI Funciton: phenylacetic acid degradation protein PaaI Locus tag: H16_A1530 Name: acdH3 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	H16_A1526	fadB	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	H16_A1527	pncA	Nicotinamidase (EC 3.5.1.19)
	H16_A1528	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	H16_A1529	paaI	phenylacetic acid degradation protein PaaI
	H16_A1530	acdH3	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -91 Score: 5.5 Sequence: TAGAACGATCGTTCGC Locus tag: H16_A1197 Name: acsA Funciton: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
	H16_A1197	acsA	Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Position: -59 Score: 5.2 Sequence: TCGAACGACCGTTCAT Locus tag: H16_A0293 Name: nppD Funciton: 2-nitropropane dioxygenase NPD
	H16_A0293	nppD	2-nitropropane dioxygenase NPD
Position: -32 Score: 4.9 Sequence: ACGAACGACCGTTCAC Locus tag: H16_A0165 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	H16_A0165	liuR	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Position: -46 Score: 5.6 Sequence: TCGAACGATCGTGCTA Locus tag: H16_A0217 Name: Rmet_0145 Funciton: TesB-like acyl-CoA thioesterase 2
	H16_A0217	Rmet_0145	TesB-like acyl-CoA thioesterase 2
Position: -43 Score: 4.9 Sequence: ACGTACGATCGTGCTA Locus tag: H16_A1102 Name: paaH1 Funciton: 3-hydroxybutyryl-CoA dehydrogenase, phenylacetic acid degradation Locus tag: H16_A1101 Name: paaG4 Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: H16_A1100 Name: BPSL1236 Funciton: Putative phosphoglycerate mutase Locus tag: H16_A1099 Name: BPSL1235 Funciton: Phosphotransferase enzyme family protein
	H16_A1102	paaH1	3-hydroxybutyryl-CoA dehydrogenase, phenylacetic acid degradation
	H16_A1101	paaG4	Enoyl-CoA hydratase (EC 4.2.1.17)
	H16_A1100	BPSL1236	Putative phosphoglycerate mutase
	H16_A1099	BPSL1235	Phosphotransferase enzyme family protein
Position: -34 Score: 4.7 Sequence: TCGAACGACCATTCAG Locus tag: H16_A3288 Name: fadD1 Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	H16_A3288	fadD1	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -87 Score: 5.3 Sequence: CCGAACGGTCGTTCTA Position: -64 Score: 5.2 Sequence: TAGCACGACCGTTCAC Locus tag: H16_A1066 Name: RSc2046 Funciton: conserved hypothetical protein, DUF1178 Locus tag: H16_A1067 Name: acdQ Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.-) Locus tag: H16_A1068 Name: acdP Funciton: acyl-CoA dehydrogenase domain protein Locus tag: H16_A1069 Name: maoC Funciton: Putative (R)-specific enoyl-CoA hydratase, MaoC- like Locus tag: H16_A1070 Name: echI Funciton: MaoC domain protein dehydratase
	H16_A1066	RSc2046	conserved hypothetical protein, DUF1178
	H16_A1067	acdQ	Acyl-CoA dehydrogenase (EC 1.3.99.-)
	H16_A1068	acdP	acyl-CoA dehydrogenase domain protein
	H16_A1069	maoC	Putative (R)-specific enoyl-CoA hydratase, MaoC- like
	H16_A1070	echI	MaoC domain protein dehydratase
Position: -73 Score: 4.5 Sequence: AAGTACGCTCGTTCGA Locus tag: H16_A1445 Name: bktB Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) Locus tag: H16_A1446 Name: RSc1638 Funciton: hypothetical protein
	H16_A1445	bktB	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	H16_A1446	RSc1638	hypothetical protein
Position: -55 Score: 4.4 Sequence: TAGTACGGTTGTTCGT Locus tag: H16_A1519 Name: alkK Funciton: Medium-chain-fatty-acid-CoA ligase
	H16_A1519	alkK	Medium-chain-fatty-acid-CoA ligase

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of FadP in Ralstonia eutropha H16

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --