Regulon of Zur in Ralstonia solanacearum GMI1000
| Regulator type: | Transcription factor |
| TF locus tag: | RSc0048 |
| Regulator family: | FUR |
| Regulation mode: | |
| Biological process: | Zinc homeostasis |
| Effector: | Zinc ion, (Zn2+) |
| Regulog: | Zur - Ralstonia |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 4 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Ralstonia
- By trascription factor - Zur
- By TF family - FUR
- By effector - Zinc ion, (Zn2+)
- By pathway - Zinc homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -114
Score: 6.1 Sequence: TATTTGCAACAGAGTTGCAAATT
Locus tag: RS00125
Name: omr2 Funciton: predicted zinc-related TonB-dependent outer membrane transporter
Locus tag: RS00126
Name: RSc2728 Funciton: hypothetical protein |
|||
|
omr2
|
predicted zinc-related TonB-dependent outer membrane transporter
|
||
|
RSc2728
|
hypothetical protein
|
||
|
Position: -95
Score: 5.7 Sequence: AATTCGCAACTTAGTTGCATTGG
Locus tag: RS04852
Name: RSc0594 Funciton: hypothetical transmembrane protein
Locus tag: RS04851
Name: omr Funciton: predicted zinc-related TonB-dependent outer membrane transporter |
|||
|
RSc0594
|
hypothetical transmembrane protein
|
||
|
omr
|
predicted zinc-related TonB-dependent outer membrane transporter
|
||
|
Position: -220
Score: 6 Sequence: TTGTCGCAACACTGTTGCATGAA
Locus tag: RSc1963
Name: tonB Funciton: Component of outer membrane metal uptake system, TonB family
Locus tag: RSc1964
Name: exbB Funciton: Component of outer membrane metal uptake system, ExbB family
Locus tag: RSc1965
Name: exbD Funciton: Component of outer membrane metal uptake system, ExbD family |
|||
|
tonB
|
Component of outer membrane metal uptake system, TonB family
|
||
|
exbB
|
Component of outer membrane metal uptake system, ExbB family
|
||
|
exbD
|
Component of outer membrane metal uptake system, ExbD family
|
||
|
Position: -37
Score: 5.9 Sequence: TTCTTGCAACTCTGTTGCGTTTG
Locus tag: RS01372
Name: zip Funciton: Zinc transporter, ZIP family |
|||
|
zip
|
Zinc transporter, ZIP family
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |