Regulon of UxaR in Thermotoga petrophila RKU-1

Properties
Regulator type:	Transcription factor
TF locus tag:	Tpet_0481
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Galacturonate utilization; Pectin utilization
Effector:
Regulog:	UxaR - Thermotogales
Statistics of regulated genes:
- Genes	18
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 18 sites [see more]

Member of regulog collections

By taxonomy - Thermotogales
By TF family - GntR/Others
By pathway - Galacturonate utilization
By pathway - Pectin utilization

Regulated operons
	Locus Tag	Name	Function
Position: -29 Score: 6.2 Sequence: TTAAACATCACATATCA Locus tag: Tpet_0858 Name: kdgA Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase Locus tag: Tpet_0857 Name: kdgK Funciton: 2-keto-3-deoxygluconate kinase (EC 2.7.1.45) Locus tag: Tpet_0856 Name: uxuB Funciton: D-mannonate oxidoreductase (EC 1.1.1.57) Locus tag: Tpet_0855 Name: uxuA Funciton: Mannonate dehydratase (EC 4.2.1.8)
	Tpet_0858	kdgA	2-dehydro-3-deoxyphosphogluconate aldolase
	Tpet_0857	kdgK	2-keto-3-deoxygluconate kinase (EC 2.7.1.45)
	Tpet_0856	uxuB	D-mannonate oxidoreductase (EC 1.1.1.57)
	Tpet_0855	uxuA	Mannonate dehydratase (EC 4.2.1.8)
Position: -39 Score: 6.2 Sequence: TGAAATATCAAACATCT Locus tag: Tpet_0485 Name: Tpet_0485 Funciton: Predicted sugar ABC transporter, periplasmic sugar-binding protein Locus tag: Tpet_0486 Name: Tpet_0486 Funciton: Predicted sugar ABC transporter, permease protein 1 Locus tag: Tpet_0487 Name: Tpet_0487 Funciton: Predicted sugar ABC transporter, permease protein 2 Locus tag: Tpet_0488 Name: Tpet_0488 Funciton: Predicted sugar ABC transporter, ATP-binding protein 2 Locus tag: Tpet_0489 Name: Tpet_0489 Funciton: Predicted sugar ABC transporter, ATP-binding protein 1 Locus tag: Tpet_0490 Name: Tpet_0490 Funciton: putative beta-glucuronidase
	Tpet_0485	Tpet_0485	Predicted sugar ABC transporter, periplasmic sugar-binding protein
	Tpet_0486	Tpet_0486	Predicted sugar ABC transporter, permease protein 1
	Tpet_0487	Tpet_0487	Predicted sugar ABC transporter, permease protein 2
	Tpet_0488	Tpet_0488	Predicted sugar ABC transporter, ATP-binding protein 2
	Tpet_0489	Tpet_0489	Predicted sugar ABC transporter, ATP-binding protein 1
	Tpet_0490	Tpet_0490	putative beta-glucuronidase
Position: -28 Score: 6.4 Sequence: TGAAACATCAAACATCT Locus tag: Tpet_0484 Name: aldH Funciton: alcohol dehydrogenase, zinc-containing Locus tag: Tpet_0483 Name: pelB Funciton: Polygalacturonase (EC 3.2.1.15) Locus tag: Tpet_0482 Name: gnd Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) Locus tag: Tpet_0481 Name: uxaR Funciton: Regulator of pectin and galacturonate utilization, GntR family Locus tag: Tpet_0480 Name: uxaE Funciton: D-tagaturonate epimerase Locus tag: Tpet_0479 Name: uxuB2 Funciton: D-mannonate dehydrogenase (EC 1.1.1.57), NADPH-dependent Locus tag: Tpet_0478 Name: gntE Funciton: novel D-mannonate-D-gluconate epimerase Locus tag: Tpet_0477 Name: gntK Funciton: Gluconokinase (EC 2.7.1.12)
	Tpet_0484	aldH	alcohol dehydrogenase, zinc-containing
	Tpet_0483	pelB	Polygalacturonase (EC 3.2.1.15)
	Tpet_0482	gnd	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
	Tpet_0481	uxaR	Regulator of pectin and galacturonate utilization, GntR family
	Tpet_0480	uxaE	D-tagaturonate epimerase
	Tpet_0479	uxuB2	D-mannonate dehydrogenase (EC 1.1.1.57), NADPH-dependent
	Tpet_0478	gntE	novel D-mannonate-D-gluconate epimerase
	Tpet_0477	gntK	Gluconokinase (EC 2.7.1.12)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of UxaR in Thermotoga petrophila RKU-1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --