Regulon of Zur in Staphylococcus carnosus subsp. carnosus TM300
| Regulator type: | Transcription factor |
| TF locus tag: | Sca_1175 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Zinc homeostasis |
| Effector: | Zinc ion, (Zn2+) |
| Regulog: | Zur - Staphylococcaceae |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 8 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By trascription factor - Zur
- By TF family - FUR
- By effector - Zinc ion, (Zn2+)
- By pathway - Zinc homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -65
Score: 6.2 Sequence: TTAATCGTAAGCATTACAATTTA
Locus tag: Sca_1177
Name: znuC Funciton: Zinc ABC transporter, ATP-binding protein ZnuC
Locus tag: Sca_1176
Name: znuB Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB
Locus tag: Sca_1175
Name: zur Funciton: Zinc homeostasis transcriptional regulator Zur, Fur family |
|||
|
znuC
|
Zinc ABC transporter, ATP-binding protein ZnuC
|
||
|
znuB
|
Zinc ABC transporter, inner membrane permease protein ZnuB
|
||
|
zur
|
Zinc homeostasis transcriptional regulator Zur, Fur family
|
||
|
Position: -58
Score: 7.1 Sequence: TAAATCGTAATTATTACGATTAA
Locus tag: Sca_1955
Name: yciC Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family |
|||
|
yciC
|
Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
|
||
|
Position: -51
Score: 6.1 Sequence: TAAATCGAAATCATTACGCTTAA
Locus tag: Sca_0100
Name: Sca_0100 Funciton: putative alkylmercury lyase |
|||
|
Sca_0100
|
putative alkylmercury lyase
|
||
|
Position: -83
Score: 6.4 Sequence: TAAAACATAACGATTACGATTTA
Locus tag: Sca_1906
Name: SA2370 Funciton: hypothetical protein
Locus tag: Sca_1905
Name: SA2369 Funciton: hypothetical protein
Locus tag: Sca_1904
Name: SA2368 Funciton: hypothetical protein |
|||
|
SA2370
|
hypothetical protein
|
||
|
SA2369
|
hypothetical protein
|
||
|
SA2368
|
hypothetical protein
|
||
|
Position: -36
Score: 7 Sequence: TAAATCGAAATTATTACGATTTA
Locus tag: Sca_0550
Name: SA0806 Funciton: hypothetical protein |
|||
|
SA0806
|
hypothetical protein
|
||
|
Position: -54
Score: 6.7 Sequence: TAAATCGTAATAATTACGATTAT
Locus tag: Sca_0977
Name: rpsN2 Funciton: 30S ribosomal protein S14 |
|||
|
rpsN2
|
30S ribosomal protein S14
|
||
|
Position: -227
Score: 6.7 Sequence: ATAATCGTAATTATTACGATTTA
Locus tag: Sca_0976
Name: rpmG2 Funciton: 50S ribosomal protein L33 |
|||
|
rpmG2
|
50S ribosomal protein L33
|
||
|
Position: -40
Score: 6.3 Sequence: TAAACCATAATGATTACGATTTG
Locus tag: Sca_1971
Name: znuA Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA |
|||
|
znuA
|
Zinc ABC transporter, periplasmic-binding protein ZnuA
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |