Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Zur in Staphylococcus carnosus subsp. carnosus TM300

Properties
Regulator type: Transcription factor
TF locus tag: Sca_1175
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Regulog: Zur - Staphylococcaceae
Statistics of regulated genes:
- Genes 12
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 56 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -65
Score: 6.2
Sequence: TTAATCGTAAGCATTACAATTTA
Locus tag: Sca_1177
Name: znuC
Funciton: Zinc ABC transporter, ATP-binding protein ZnuC
Locus tag: Sca_1176
Name: znuB
Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB
Locus tag: Sca_1175
Name: zur
Funciton: Zinc homeostasis transcriptional regulator Zur, Fur family
znuC
Zinc ABC transporter, ATP-binding protein ZnuC
znuB
Zinc ABC transporter, inner membrane permease protein ZnuB
zur
Zinc homeostasis transcriptional regulator Zur, Fur family

Position: -58
Score: 7.1
Sequence: TAAATCGTAATTATTACGATTAA
Locus tag: Sca_1955
Name: yciC
Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
yciC
Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family

Position: -51
Score: 6.1
Sequence: TAAATCGAAATCATTACGCTTAA
Locus tag: Sca_0100
Name: Sca_0100
Funciton: putative alkylmercury lyase
Sca_0100
putative alkylmercury lyase

Position: -83
Score: 6.4
Sequence: TAAAACATAACGATTACGATTTA
Locus tag: Sca_1906
Name: SA2370
Funciton: hypothetical protein
Locus tag: Sca_1905
Name: SA2369
Funciton: hypothetical protein
Locus tag: Sca_1904
Name: SA2368
Funciton: hypothetical protein
SA2370
hypothetical protein
SA2369
hypothetical protein
SA2368
hypothetical protein

Position: -36
Score: 7
Sequence: TAAATCGAAATTATTACGATTTA
Locus tag: Sca_0550
Name: SA0806
Funciton: hypothetical protein
SA0806
hypothetical protein

Position: -54
Score: 6.7
Sequence: TAAATCGTAATAATTACGATTAT
Locus tag: Sca_0977
Name: rpsN2
Funciton: 30S ribosomal protein S14
rpsN2
30S ribosomal protein S14

Position: -227
Score: 6.7
Sequence: ATAATCGTAATTATTACGATTTA
Locus tag: Sca_0976
Name: rpmG2
Funciton: 50S ribosomal protein L33
rpmG2
50S ribosomal protein L33

Position: -40
Score: 6.3
Sequence: TAAACCATAATGATTACGATTTG
Locus tag: Sca_1971
Name: znuA
Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA
znuA
Zinc ABC transporter, periplasmic-binding protein ZnuA
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD