Regulon of XylR in Clostridium butyricum 5521
| Regulator type: | Transcription factor |
| TF locus tag: | CBY_2343 |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Xylose utilization |
| Effector: | Xylose |
| Regulog: | XylR - Clostridia-1 |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-1
- By TF family - ROK
- By effector - Xylose
- By pathway - Xylose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -70
Score: 6.4 Sequence: ACTTATTAAATATATTTTTAAAAGA
Locus tag: CBY_2344
Name: tal Funciton: Transaldolase (EC 2.2.1.2)
Locus tag: CBY_2345
Name: tkt Funciton: Transketolase (EC 2.2.1.1) |
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tal
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Transaldolase (EC 2.2.1.2)
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tkt
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Transketolase (EC 2.2.1.1)
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Position: -87
Score: 7.1 Sequence: ACTTATTAAAATACATTTAAAAAGT
Locus tag: CBY_2380
Name: CAC2611 Funciton: hypothetical protein
Locus tag: CBY_2379
Name: xylA-II Funciton: novel Xylose isomerase (EC 5.3.1.5) |
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CAC2611
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hypothetical protein
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xylA-II
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novel Xylose isomerase (EC 5.3.1.5)
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Position: -92
Score: 7.1 Sequence: ACTTATTAAAATACATTTAAAAAGA
Position: -80
Score: 5.6 Sequence: ACATTTAAAAAGAATTTTAATAATT
Locus tag: CBY_2342
Name: xylB Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: CBY_2343
Name: xylR Funciton: Xylose repressor XylR, ROK family |
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xylB
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Xylulose kinase (EC 2.7.1.17)
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xylR
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Xylose repressor XylR, ROK family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |