Regulon of XylR in Clostridium butyricum 5521

Properties
Regulator type:	Transcription factor
TF locus tag:	CBY_2343
Regulator family:	ROK
Regulation mode:	repressor
Biological process:	Xylose utilization
Effector:	Xylose
Regulog:	XylR - Clostridia-1
Statistics of regulated genes:
- Genes	6
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 20 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-1
By TF family - ROK
By effector - Xylose
By pathway - Xylose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -70 Score: 6.4 Sequence: ACTTATTAAATATATTTTTAAAAGA Locus tag: CBY_2344 Name: tal Funciton: Transaldolase (EC 2.2.1.2) Locus tag: CBY_2345 Name: tkt Funciton: Transketolase (EC 2.2.1.1)
	CBY_2344	tal	Transaldolase (EC 2.2.1.2)
	CBY_2345	tkt	Transketolase (EC 2.2.1.1)
Position: -87 Score: 7.1 Sequence: ACTTATTAAAATACATTTAAAAAGT Locus tag: CBY_2380 Name: CAC2611 Funciton: hypothetical protein Locus tag: CBY_2379 Name: xylA-II Funciton: novel Xylose isomerase (EC 5.3.1.5)
	CBY_2380	CAC2611	hypothetical protein
	CBY_2379	xylA-II	novel Xylose isomerase (EC 5.3.1.5)
Position: -92 Score: 7.1 Sequence: ACTTATTAAAATACATTTAAAAAGA Position: -80 Score: 5.6 Sequence: ACATTTAAAAAGAATTTTAATAATT Locus tag: CBY_2342 Name: xylB Funciton: Xylulose kinase (EC 2.7.1.17) Locus tag: CBY_2343 Name: xylR Funciton: Xylose repressor XylR, ROK family
	CBY_2342	xylB	Xylulose kinase (EC 2.7.1.17)
	CBY_2343	xylR	Xylose repressor XylR, ROK family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD