Profile of regulator XylR in Clostridia-1
Properties
| Regulator family: |
ROK |
| Regulation mode: |
repressor |
| Biological process: |
Xylose utilization |
| Effector: |
Xylose |
| Regulog: |
XylR - Clostridia-1 |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Clostridium acetobutylicum ATCC 824
|
|
CAC3451 |
xynT |
-96 |
7.1 |
ACTTTTTAAAGTGCTTTTTAAAAGT |
|
CAC3451 |
xynT |
-84 |
5.6 |
GCTTTTTAAAAGTTATTGAAAAAGT |
|
CAC3673 |
xylR |
-97 |
6.8 |
ACTTTATAAAACAACTTTATAAAGG |
|
CAC2612 |
xylB |
-50 |
7.2 |
ACTTATTAAAGGATATTTAAAAAGT |
|
CAC2611 |
CAC2611 |
-109 |
7.1 |
ACTTATTAAACAAACTTTAAAAACA |
|
Clostridium beijerincki NCIMB 8052
|
|
Cbei_2386 |
tal |
-314 |
6.6 |
ACTTATTAAATAAATTTTTAAAATA |
|
Cbei_2377 |
xylF1 |
-78 |
5.9 |
CATTATTAAAGGACATTTTAAAAGT |
|
Cbei_0109 |
xylT |
-393 |
6.1 |
ACTTTTTAAATTACTTTTTAAAGTT |
|
Cbei_2386 |
tal |
-302 |
6.2 |
AATTTTTAAAATATATTTTTAAAGT |
|
Cbei_2383 |
xylA |
-281 |
6.2 |
ACTTATAAAATAACATTTAAAAAGT |
|
Cbei_0109 |
xylT |
-381 |
6.3 |
ACTTTTTAAAGTTTATTGAAAAAGG |
|
Cbei_2389 |
xylA-II |
-121 |
5.3 |
AATTATTAAATAAACTATAAGAATA |
|
Cbei_2384 |
xylB |
-98 |
7.1 |
ACTTATTAAAATACATTTAAAAAGT |
|
Cbei_2388 |
CAC2611 |
-132 |
5.8 |
AATTATTAAAAGATATGTATAAAGA |
|
Cbei_4681 |
xylA-II |
-259 |
6.5 |
ACTTATCAAACAACATTTAAAAAGT |
|
Cbei_4126 |
xynB |
-95 |
5.5 |
AGTTTATAAAGGAAAGTTAAGAATA |
|
Clostridium butyricum 5521
|
|
CBY_2344 |
tal |
-70 |
6.4 |
ACTTATTAAATATATTTTTAAAAGA |
|
CBY_2342 |
xylB |
-80 |
5.6 |
ACATTTAAAAAGAATTTTAATAATT |
|
CBY_2380 |
CAC2611 |
-87 |
7.1 |
ACTTATTAAAATACATTTAAAAAGT |
|
CBY_2342 |
xylB |
-92 |
7.1 |
ACTTATTAAAATACATTTAAAAAGA |
Export
|
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