Regulon of HutC in Ralstonia metallidurans CH34
| Regulator type: | Transcription factor |
| TF locus tag: | Rmet_5049, Rmet_2856 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Histidine utilization |
| Effector: | cis-Urocanic acid |
| Regulog: | HutC - Ralstonia |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Ralstonia
- By trascription factor - HutC
- By TF family - GntR/Others
- By effector - cis-Urocanic acid
- By pathway - Histidine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -59
Score: 5.1 Sequence: TAACCTGTATAGACAGGCCC
Locus tag: Rmet_2855
Name: hutH Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
Locus tag: Rmet_2854
Name: hutU Funciton: Urocanate hydratase (EC 4.2.1.49)
Locus tag: Rmet_2853
Name: hutD Funciton: Conserved hypothetical protein related to histidine degradation
Locus tag: Rmet_2852
Name: hutI Funciton: Imidazolonepropionase (EC 3.5.2.7)
Locus tag: Rmet_2851
Name: hutF Funciton: Formiminoglutamic iminohydrolase (EC 3.5.3.13)
Locus tag: Rmet_2850
Name: hutG Funciton: N-formylglutamate deformylase (EC 3.5.1.68) |
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hutH
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Histidine ammonia-lyase (EC 4.3.1.3)
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hutU
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Urocanate hydratase (EC 4.2.1.49)
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hutD
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Conserved hypothetical protein related to histidine degradation
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hutI
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Imidazolonepropionase (EC 3.5.2.7)
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hutF
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Formiminoglutamic iminohydrolase (EC 3.5.3.13)
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hutG
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N-formylglutamate deformylase (EC 3.5.1.68)
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Position: -271
Score: 5.8 Sequence: CTTGTTGTATATACAGCAAT
Position: -114
Score: 5.2 Sequence: TGACTTGTATATACAGCGTT
Locus tag: Rmet_2859
Name: hisX Funciton: Putative histidine ABC transporter, substrate binding protein
Locus tag: Rmet_2858
Name: hisY Funciton: Putative histidine ABC transporter, permease protein
Locus tag: Rmet_2857
Name: hisZ Funciton: Putative histidine ABC transporter, ATPase protein
Locus tag: Rmet_2856
Name: hutC Funciton: Histidine utilization repressor, GntR family |
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hisX
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Putative histidine ABC transporter, substrate binding protein
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hisY
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Putative histidine ABC transporter, permease protein
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hisZ
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Putative histidine ABC transporter, ATPase protein
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hutC
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Histidine utilization repressor, GntR family
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Position: -88
Score: 4.7 Sequence: CAACTTGTCTATACAATACT
Locus tag: Rmet_5048
Name: hutU Funciton: Urocanate hydratase (EC 4.2.1.49)
Locus tag: Rmet_5047
Name: hutH Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
Locus tag: Rmet_5046
Name: hisT Funciton: Histidine transport protein (permease)
Locus tag: Rmet_5045
Name: hutG2 Funciton: Formiminoglutamase (EC 3.5.3.8) |
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hutU
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Urocanate hydratase (EC 4.2.1.49)
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hutH
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Histidine ammonia-lyase (EC 4.3.1.3)
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hisT
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Histidine transport protein (permease)
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hutG2
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Formiminoglutamase (EC 3.5.3.8)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |