Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Bifidobacterium longum subsp. infantis ATCC 15697

Properties
Regulator type: Transcription factor
TF locus tag: Blon_0842
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Bifidobacteriaceae
Statistics of regulated genes:
- Genes 10
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 97 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -39
Score: 5.9
Sequence: TCGAACGTCTGTTCGA
Locus tag: Blon_0716
Name: rarA
Funciton: Recombination factor protein RarA
rarA
Recombination factor protein RarA

Position: -173
Score: 5.6
Sequence: TCGAACAGATGTTCGT
Locus tag: Blon_0949
Name: recA
Funciton: Recombinase A
Locus tag: Blon_0950
Name: recX
Funciton: Regulatory protein RecX
recA
Recombinase A
recX
Regulatory protein RecX

Position: -136
Score: 5.9
Sequence: TCGAACAGATGTTCTA
Position: -120
Score: 5.2
Sequence: TCGAACAACTGTTCTT
Position: -100
Score: 5
Sequence: TGGCACAAATGTTCGA
Position: -67
Score: 5.7
Sequence: TCGAACAGATGTTTGA
Locus tag: Blon_0842
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -8
Score: 5.2
Sequence: TCGTACATATGTACGA
Locus tag: Blon_0964
Name: lhr
Funciton: Probable ATP-dependent helicase lhr (EC 3.6.1.-)
lhr
Probable ATP-dependent helicase lhr (EC 3.6.1.-)

Position: -50
Score: 6.2
Sequence: TCGAACAGATGTTCGA
Locus tag: Blon_1157
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: Blon_1158
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA
Holliday junction DNA helicase RuvA
ruvB
Holliday junction DNA helicase RuvB

Position: -204
Score: 5.6
Sequence: TCGAACAAGCGTTCGA
Locus tag: Blon_1082
Name: uvrA
Funciton: Excinuclease ABC subunit A
Locus tag: Blon_1083
Name: uvrC
Funciton: Excinuclease ABC subunit C
uvrA
Excinuclease ABC subunit A
uvrC
Excinuclease ABC subunit C

Position: -64
Score: 6.1
Sequence: TCGAACAAATGTTCGA
Locus tag: Blon_1951
Name: dinP1
Funciton: DNA polymerase IV (EC 2.7.7.7)
dinP1
DNA polymerase IV (EC 2.7.7.7)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD