Profile of regulator LexA in Bifidobacteriaceae
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Bifidobacteriaceae |
Member of regulog collections
- By trascription factor - LexA
- By taxonomy - Bifidobacteriaceae
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Bifidobacterium adolescentis ATCC 15703 | |||||
| BAD_0676 | uvrB | -87 | 5.8 | TAGAACACATGTTCGA | |
| BAD_1115 | lexA | -8 | 5.7 | TCGAACAGATGTTTGA | |
| BAD_1024 | recA | -190 | 5.7 | TCGAACAGATGTTCGG | |
| BAD_0804 | ruvA | -41 | 5.9 | TCGAACAGATGTTCTA | |
| BAD_0840 | uvrA | -78 | 5.6 | TAGAACACCTGTTCGA | |
| BAD_1008 | lhr | 25 | 5.5 | TCGAACGTATGTACGA | |
| BAD_1115 | lexA | -76 | 5.8 | TCGAACAGCTGTTCTA | |
| BAD_1115 | lexA | -60 | 5 | TCGAACGCTTGTTCCA | |
| BAD_1115 | lexA | -40 | 5.2 | TGGCACATATGTTCGA | |
| BAD_0522 | dinP1 | -110 | 5.7 | TCGAACAGCCGTTCGA | |
| BAD_0585 | rarA | -48 | 5.8 | TCGAACGTGTGTTCGA | |
| Bifidobacterium angulatum DSM 20098 | |||||
| BIFANG_00697 | dinP2 | -47 | 5.9 | TCGAACAAGTGTTCGA | |
| BIFANG_01139 | uvrB | -80 | 5.6 | TGGAACAAATGTTCGA | |
| BIFANG_01578 | recA | -229 | 5.7 | TCGAACAAATGTTCGC | |
| BIFANG_00990 | lexA | -113 | 5.9 | TCGAACATCTGTTCTA | |
| BIFANG_00990 | lexA | -97 | 5.6 | TCGAACGTTTGTTCTA | |
| BIFANG_01367 | ruvA | -29 | 6 | TCGAACAGTTGTTCGA | |
| BIFANG_01450 | uvrA | -82 | 5.8 | GCGAACATCTGTTCGA | |
| BIFANG_00973 | dinP1 | -41 | 6 | TCGAACGTATGTTCGA | |
| BIFANG_01557 | lhr | -8 | 5.8 | TCGAACATATGTACGA | |
| BIFANG_00990 | lexA | -43 | 5.7 | TCGAACAAATGTTTGA | |
| BIFANG_00990 | lexA | -77 | 5 | TTGCACAGATGTTCGA | |
| Bifidobacterium animalis subsp. lactis AD011 | |||||
| BLA_0934 | recA | -206 | 5.7 | TCGAACAAATGTTCGC | |
| BLA_0790 | lexA | -64 | 5.7 | TCGAACATCTGTTTGA | |
| BLA_1342 | ruvA | -33 | 5.8 | CCGAACATATGTTCGA | |
| BLA_0790 | lexA | -127 | 5.8 | TCGAACAAATGTTCTA | |
| BLA_0790 | lexA | -94 | 5.6 | TCGCACATCTGTTCGA | |
| BLA_1496 | uvrB | -67 | 5.6 | TAGAACAGACGTTCGA | |
| BLA_0349 | dinP2 | -29 | 5.1 | TCGAACATCTGTTCAG | |
| BLA_0950 | lhr | -8 | 5.7 | TCGAACATATGTGCGA | |
| BLA_1129 | dinP1 | -27 | 5.8 | TCGAACGTTTGTTCGA | |
| BLA_1204 | rarA | -56 | 6.1 | TCGAACATTTGTTCGA | |
| BLA_1372 | uvrA | -88 | 5.9 | TCGAACAAGTGTTCGA | |
| Bifidobacterium bifidum NCIMB 41171 | |||||
| BbifN4_010100002264 | lexA | -51 | 4.9 | TCGAACGAATGTTTGT | |
| BbifN4_010100006154 | recA | -246 | 5.5 | TCGAACAGGTGTTCGC | |
| BbifN4_010100004709 | ruvA | -169 | 5.4 | TCGAACAGATGTTCTG | |
| BbifN4_010100004854 | uvrA | -90 | 5.6 | TCGAACTGATGTTCGA | |
| BbifN4_010100002264 | lexA | -105 | 4.5 | TAGAACAACTGTACTC | |
| BbifN4_010100006079 | lhr | -8 | 5.1 | TCGAATATATGTACGA | |
| BbifN4_010100006359 | dinP1 | -61 | 4.6 | TCGAACATATGTCTCA | |
| BbifN4_010100002924 | rarA | -38 | 5.6 | TCGAACCTATGTTCGA | |
| Bifidobacterium breve DSM 20213 | |||||
| BIFBRE_01637 | recA | -157 | 5.7 | TCGAACAAATGTTCGC | |
| BIFBRE_01347 | ruvA | -36 | 6 | TCGAACAGTTGTTCGA | |
| BIFBRE_01804 | lexA | -67 | 5.7 | TCGAACAGATGTTTGA | |
| BIFBRE_01621 | lhr | 22 | 5.7 | TCGAACATATGTGCGA | |
| BIFBRE_01804 | lexA | -120 | 5.4 | TCGAACATCTGTTCTT | |
| BIFBRE_01804 | lexA | -100 | 5 | TGGCACAAATGTTCGA | |
| BIFBRE_01317 | uvrA | -106 | 6 | TCGAACATGTGTTCGA | |
| BIFBRE_00833 | dinP1 | -8 | 6.1 | TCGAACAAATGTTCGA | |
| BIFBRE_00563 | rarA | -39 | 5.9 | TCGAACGTCTGTTCGA | |
| BIFBRE_01804 | lexA | -136 | 5.6 | TCGAACAAGTGTTCTA | |
| Bifidobacterium dentium Bd1 | |||||
| BDP_0902 | uvrB | -58 | 5.7 | TAGAACGTATGTTCGA | |
| BDP_1421 | recA | -235 | 5.6 | TCGAACAGATGTTCGT | |
| BDP_1131 | uvrA | -82 | 5.6 | TCGAACAGGTGTTCTA | |
| BDP_1176 | ruvA | -151 | 5.9 | TCGAACAGATGTTCTA | |
| BDP_0412 | dinP2 | 4 | 5.2 | TCGAACATCTGTTTCA | |
| BDP_1405 | lhr | -8 | 5.5 | TCGAACGTATGTACGA | |
| BDP_1556 | lexA | -286 | 5.7 | TCGAACAGATGTTTGA | |
| BDP_0721 | dinP1 | -75 | 5.9 | TCGAACGGATGTTCGA | |
| BDP_0795 | rarA | -21 | 5.8 | TCGAACGTGTGTTCGA | |
| Bifidobacterium gallicum DSM 20093 | |||||
| BIFGAL_00191 | recA | -152 | 5.7 | TCGAACATTTGTTCGC | |
| BIFGAL_00302 | lexA | -25 | 5.7 | TCGAACATTTGTTCGC | |
| BIFGAL_00302 | lexA | 11 | 5.6 | TCGCACATTTGTTCGA | |
| BIFGAL_01661 | ruvA | -125 | 5.8 | GCGAACATCTGTTCGA | |
| BIFGAL_01317 | lhr | -8 | 5 | TCGAACATATGAGCGA | |
| BIFGAL_01091 | dinP1 | -8 | 6.3 | TCGAACATATGTTCGA | |
| BIFGAL_01848 | rarA | -68 | 6.3 | TCGAACATATGTTCGA | |
| BIFGAL_01593 | uvrA | -102 | 6 | TCGAACATGTGTTCGA | |
| Bifidobacterium longum NCC2705 | |||||
| BL1415 | recA | -236 | 5.6 | TCGAACAAATGTTCGT | |
| BL0728 | ruvA | -50 | 6 | TCGAACAGTTGTTCGA | |
| BL1310 | lexA | -120 | 5.2 | TCGAACAACTGTTCTT | |
| BL1310 | lexA | -100 | 4.7 | TGGCACAAACGTTCGA | |
| BL1310 | lexA | -67 | 5.7 | TCGAACAGATGTTTGA | |
| BL1310 | lexA | -136 | 5.9 | TCGAACAGATGTTCTA | |
| BL1432 | lhr | -8 | 5.2 | TCGTACATATGTACGA | |
| BL1114 | dinP1 | -58 | 6.1 | TCGAACAAATGTTCGA | |
| BL0029 | rarA | -39 | 5.9 | TCGAACGTCTGTTCGA | |
| BL0702 | uvrA | -102 | 5.6 | TCGAACAAGCGTTCGA | |
| Bifidobacterium longum subsp. infantis ATCC 15697 | |||||
| Blon_0949 | recA | -173 | 5.6 | TCGAACAGATGTTCGT | |
| Blon_1157 | ruvA | -50 | 6.2 | TCGAACAGATGTTCGA | |
| Blon_0842 | lexA | -136 | 5.9 | TCGAACAGATGTTCTA | |
| Blon_0842 | lexA | -120 | 5.2 | TCGAACAACTGTTCTT | |
| Blon_0842 | lexA | -100 | 5 | TGGCACAAATGTTCGA | |
| Blon_0842 | lexA | -67 | 5.7 | TCGAACAGATGTTTGA | |
| Blon_0964 | lhr | -8 | 5.2 | TCGTACATATGTACGA | |
| Blon_1082 | uvrA | -204 | 5.6 | TCGAACAAGCGTTCGA | |
| Blon_1951 | dinP1 | -64 | 6.1 | TCGAACAAATGTTCGA | |
| Blon_0716 | rarA | -39 | 5.9 | TCGAACGTCTGTTCGA | |
| Gardnerella vaginalis 409-05 | |||||
| HMPREF0424_0243 | dinP2 | -107 | 5.6 | TCGAACGTTTGTTCTA | |
| HMPREF0424_1021 | recA | -179 | 5.7 | TCGAACAAATGTTCGC | |
| HMPREF0424_0837 | ruvA | -79 | 5.6 | TAGAACAGATGTTCTA | |
| HMPREF0424_0816 | uvrA | -92 | 5.6 | TCGAACACTTGTTCTA | |
| HMPREF0424_0572 | lexA | -114 | 4.9 | TCGAACAGATGTATTA | |
| HMPREF0424_0572 | lexA | -94 | 4.6 | TGACACATTTGTTCGA | |
| HMPREF0424_0572 | lexA | -62 | 5.7 | TCGAACAGATGTTTGA | |
| HMPREF0424_0826 | rarA | -38 | 5.6 | TCGAACGTTTGTTCTA | |
| HMPREF0424_0572 | lexA | -130 | 4.8 | CTGAACATTTGTTCTA | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |