Regulon of LexA in Bifidobacterium dentium Bd1

Properties
Regulator type:	Transcription factor
TF locus tag:	BDP_1556
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Bifidobacteriaceae
Statistics of regulated genes:
- Genes	11
- Operons	9
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 97 sites [see more]

Member of regulog collections

By trascription factor - LexA
By taxonomy - Bifidobacteriaceae
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -151 Score: 5.9 Sequence: TCGAACAGATGTTCTA Locus tag: BDP_1176 Name: ruvA Funciton: Holliday junction DNA helicase RuvA Locus tag: BDP_1175 Name: ruvB Funciton: Holliday junction DNA helicase RuvB
	BDP_1176	ruvA	Holliday junction DNA helicase RuvA
	BDP_1175	ruvB	Holliday junction DNA helicase RuvB
Position: -58 Score: 5.7 Sequence: TAGAACGTATGTTCGA Locus tag: BDP_0902 Name: uvrB Funciton: Excinuclease ABC subunit B
	BDP_0902	uvrB	Excinuclease ABC subunit B
Position: -286 Score: 5.7 Sequence: TCGAACAGATGTTTGA Locus tag: BDP_1556 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	BDP_1556	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -8 Score: 5.5 Sequence: TCGAACGTATGTACGA Locus tag: BDP_1405 Name: lhr Funciton: Probable ATP-dependent helicase lhr (EC 3.6.1.-)
	BDP_1405	lhr	Probable ATP-dependent helicase lhr (EC 3.6.1.-)
Position: 4 Score: 5.2 Sequence: TCGAACATCTGTTTCA Locus tag: BDP_0412 Name: dinP2 Funciton: DNA polymerase IV (EC 2.7.7.7)
	BDP_0412	dinP2	DNA polymerase IV (EC 2.7.7.7)
Position: -235 Score: 5.6 Sequence: TCGAACAGATGTTCGT Locus tag: BDP_1421 Name: recA Funciton: Recombinase A
	BDP_1421	recA	Recombinase A
Position: -75 Score: 5.9 Sequence: TCGAACGGATGTTCGA Locus tag: BDP_0721 Name: dinP1 Funciton: DNA polymerase IV (EC 2.7.7.7)
	BDP_0721	dinP1	DNA polymerase IV (EC 2.7.7.7)
Position: -21 Score: 5.8 Sequence: TCGAACGTGTGTTCGA Locus tag: BDP_0795 Name: rarA Funciton: Recombination factor protein RarA
	BDP_0795	rarA	Recombination factor protein RarA
Position: -82 Score: 5.6 Sequence: TCGAACAGGTGTTCTA Locus tag: BDP_1131 Name: uvrA Funciton: Excinuclease ABC subunit A Locus tag: BDP_1132 Name: uvrC Funciton: Excinuclease ABC subunit C
	BDP_1131	uvrA	Excinuclease ABC subunit A
	BDP_1132	uvrC	Excinuclease ABC subunit C

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of LexA in Bifidobacterium dentium Bd1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --