Regulon of LexA in Bifidobacterium breve DSM 20213

Properties
Regulator type:	Transcription factor
TF locus tag:	BIFBRE_01804
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Bifidobacteriaceae
Statistics of regulated genes:
- Genes	10
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 97 sites [see more]

Member of regulog collections

By trascription factor - LexA
By taxonomy - Bifidobacteriaceae
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -136 Score: 5.6 Sequence: TCGAACAAGTGTTCTA Position: -120 Score: 5.4 Sequence: TCGAACATCTGTTCTT Position: -100 Score: 5 Sequence: TGGCACAAATGTTCGA Position: -67 Score: 5.7 Sequence: TCGAACAGATGTTTGA Locus tag: BIFBRE_01804 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	BIFBRE_01804	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -36 Score: 6 Sequence: TCGAACAGTTGTTCGA Locus tag: BIFBRE_01347 Name: ruvA Funciton: Holliday junction DNA helicase RuvA Locus tag: BIFBRE_01348 Name: ruvB Funciton: Holliday junction DNA helicase RuvB
	BIFBRE_01347	ruvA	Holliday junction DNA helicase RuvA
	BIFBRE_01348	ruvB	Holliday junction DNA helicase RuvB
Position: -157 Score: 5.7 Sequence: TCGAACAAATGTTCGC Locus tag: BIFBRE_01637 Name: recA Funciton: Recombinase A
	BIFBRE_01637	recA	Recombinase A
Position: 22 Score: 5.7 Sequence: TCGAACATATGTGCGA Locus tag: BIFBRE_01621 Name: lhr Funciton: Probable ATP-dependent helicase lhr (EC 3.6.1.-)
	BIFBRE_01621	lhr	Probable ATP-dependent helicase lhr (EC 3.6.1.-)
Position: -8 Score: 6.1 Sequence: TCGAACAAATGTTCGA Locus tag: BIFBRE_00833 Name: dinP1 Funciton: DNA polymerase IV (EC 2.7.7.7)
	BIFBRE_00833	dinP1	DNA polymerase IV (EC 2.7.7.7)
Position: -106 Score: 6 Sequence: TCGAACATGTGTTCGA Locus tag: BIFBRE_01317 Name: uvrA Funciton: Excinuclease ABC subunit A Locus tag: BIFBRE_01318 Name: uvrA Funciton: Excinuclease ABC subunit A Locus tag: BIFBRE_01319 Name: uvrC Funciton: Excinuclease ABC subunit C
	BIFBRE_01317	uvrA	Excinuclease ABC subunit A
	BIFBRE_01318	uvrA	Excinuclease ABC subunit A
	BIFBRE_01319	uvrC	Excinuclease ABC subunit C
Position: -39 Score: 5.9 Sequence: TCGAACGTCTGTTCGA Locus tag: BIFBRE_00563 Name: rarA Funciton: Recombination factor protein RarA
	BIFBRE_00563	rarA	Recombination factor protein RarA

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