Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Bifidobacterium angulatum DSM 20098

Properties
Regulator type: Transcription factor
TF locus tag: BIFANG_00990
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Bifidobacteriaceae
Statistics of regulated genes:
- Genes 11
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 97 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -29
Score: 6
Sequence: TCGAACAGTTGTTCGA
Locus tag: BIFANG_01367
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: BIFANG_01366
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA
Holliday junction DNA helicase RuvA
ruvB
Holliday junction DNA helicase RuvB

Position: -80
Score: 5.6
Sequence: TGGAACAAATGTTCGA
Locus tag: BIFANG_01139
Name: uvrB
Funciton: Excinuclease ABC subunit B
uvrB
Excinuclease ABC subunit B

Position: -8
Score: 5.8
Sequence: TCGAACATATGTACGA
Locus tag: BIFANG_01557
Name: lhr
Funciton: Probable ATP-dependent helicase lhr (EC 3.6.1.-)
lhr
Probable ATP-dependent helicase lhr (EC 3.6.1.-)

Position: -47
Score: 5.9
Sequence: TCGAACAAGTGTTCGA
Locus tag: BIFANG_00697
Name: dinP2
Funciton: DNA polymerase IV (EC 2.7.7.7)
dinP2
DNA polymerase IV (EC 2.7.7.7)

Position: -229
Score: 5.7
Sequence: TCGAACAAATGTTCGC
Locus tag: BIFANG_01578
Name: recA
Funciton: Recombinase A
Locus tag: BIFANG_01577
Name: recX
Funciton: Regulatory protein RecX
recA
Recombinase A
recX
Regulatory protein RecX

Position: -113
Score: 5.9
Sequence: TCGAACATCTGTTCTA
Position: -97
Score: 5.6
Sequence: TCGAACGTTTGTTCTA
Position: -77
Score: 5
Sequence: TTGCACAGATGTTCGA
Position: -43
Score: 5.7
Sequence: TCGAACAAATGTTTGA
Locus tag: BIFANG_00990
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: -82
Score: 5.8
Sequence: GCGAACATCTGTTCGA
Locus tag: BIFANG_01450
Name: uvrA
Funciton: Excinuclease ABC subunit A
Locus tag: BIFANG_01449
Name: uvrC
Funciton: Excinuclease ABC subunit C
uvrA
Excinuclease ABC subunit A
uvrC
Excinuclease ABC subunit C

Position: -41
Score: 6
Sequence: TCGAACGTATGTTCGA
Locus tag: BIFANG_00973
Name: dinP1
Funciton: DNA polymerase IV (EC 2.7.7.7)
dinP1
DNA polymerase IV (EC 2.7.7.7)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD