Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Bifidobacterium adolescentis ATCC 15703

Properties
Regulator type: Transcription factor
TF locus tag: BAD_1115
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Bifidobacteriaceae
Statistics of regulated genes:
- Genes 11
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 97 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -78
Score: 5.6
Sequence: TAGAACACCTGTTCGA
Locus tag: BAD_0840
Name: uvrA
Funciton: Excinuclease ABC subunit A
Locus tag: BAD_0839
Name: uvrC
Funciton: Excinuclease ABC subunit C
uvrA
Excinuclease ABC subunit A
uvrC
Excinuclease ABC subunit C

Position: -87
Score: 5.8
Sequence: TAGAACACATGTTCGA
Locus tag: BAD_0676
Name: uvrB
Funciton: Excinuclease ABC subunit B
uvrB
Excinuclease ABC subunit B

Position: -41
Score: 5.9
Sequence: TCGAACAGATGTTCTA
Locus tag: BAD_0804
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: BAD_0805
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA
Holliday junction DNA helicase RuvA
ruvB
Holliday junction DNA helicase RuvB

Position: -76
Score: 5.8
Sequence: TCGAACAGCTGTTCTA
Position: -60
Score: 5
Sequence: TCGAACGCTTGTTCCA
Position: -40
Score: 5.2
Sequence: TGGCACATATGTTCGA
Position: -8
Score: 5.7
Sequence: TCGAACAGATGTTTGA
Locus tag: BAD_1115
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)

Position: 25
Score: 5.5
Sequence: TCGAACGTATGTACGA
Locus tag: BAD_1008
Name: lhr
Funciton: Probable ATP-dependent helicase lhr (EC 3.6.1.-)
lhr
Probable ATP-dependent helicase lhr (EC 3.6.1.-)

Position: -190
Score: 5.7
Sequence: TCGAACAGATGTTCGG
Locus tag: BAD_1024
Name: recA
Funciton: Recombinase A
Locus tag: BAD_1023
Name: recX
Funciton: Regulatory protein RecX
recA
Recombinase A
recX
Regulatory protein RecX

Position: -110
Score: 5.7
Sequence: TCGAACAGCCGTTCGA
Locus tag: BAD_0522
Name: dinP1
Funciton: DNA polymerase IV (EC 2.7.7.7)
dinP1
DNA polymerase IV (EC 2.7.7.7)

Position: -48
Score: 5.8
Sequence: TCGAACGTGTGTTCGA
Locus tag: BAD_0585
Name: rarA
Funciton: Recombination factor protein RarA
rarA
Recombination factor protein RarA
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