Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NrdR in Gardnerella vaginalis 409-05

Properties
Regulator type: Transcription factor
TF locus tag: HMPREF0424_0575
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Regulog: NrdR - Bifidobacteriaceae
Statistics of regulated genes:
- Genes 6
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 31 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -129
Score: 4.1
Sequence: TAACTATATATAGTGT
Position: -97
Score: 4.5
Sequence: CCACTATAAATAGTGC
Locus tag: HMPREF0424_0179
Name: nrdH
Funciton: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
Locus tag: HMPREF0424_0178
Name: nrdI
Funciton: Ribonucleotide reduction protein NrdI
Locus tag: HMPREF0424_0177
Name: nrdE
Funciton: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: HMPREF0424_0176
Name: nrdF
Funciton: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
nrdH
Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
nrdI
Ribonucleotide reduction protein NrdI
nrdE
Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
nrdF
Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)

Position: -148
Score: 4.1
Sequence: TCACTATATATAGGTG
Position: -116
Score: 4.7
Sequence: GCCCTAGATATTGTGC
Locus tag: HMPREF0424_1125
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: HMPREF0424_1124
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdG
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD