Regulon of NrdR in Gardnerella vaginalis 409-05

Properties
Regulator type:	Transcription factor
TF locus tag:	HMPREF0424_0575
Regulator family:	NrdR
Regulation mode:	repressor
Biological process:	Deoxyribonucleotide biosynthesis
Effector:	Deoxyribonucleotides
Regulog:	NrdR - Bifidobacteriaceae
Statistics of regulated genes:
- Genes	6
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 31 sites [see more]

Member of regulog collections

By trascription factor - NrdR
By taxonomy - Bifidobacteriaceae
By TF family - NrdR
By effector - Deoxyribonucleotides
By pathway - Deoxyribonucleotide biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -129 Score: 4.1 Sequence: TAACTATATATAGTGT Position: -97 Score: 4.5 Sequence: CCACTATAAATAGTGC Locus tag: HMPREF0424_0179 Name: nrdH Funciton: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Locus tag: HMPREF0424_0178 Name: nrdI Funciton: Ribonucleotide reduction protein NrdI Locus tag: HMPREF0424_0177 Name: nrdE Funciton: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) Locus tag: HMPREF0424_0176 Name: nrdF Funciton: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
	HMPREF0424_0179	nrdH	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
	HMPREF0424_0178	nrdI	Ribonucleotide reduction protein NrdI
	HMPREF0424_0177	nrdE	Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
	HMPREF0424_0176	nrdF	Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
Position: -148 Score: 4.1 Sequence: TCACTATATATAGGTG Position: -116 Score: 4.7 Sequence: GCCCTAGATATTGTGC Locus tag: HMPREF0424_1125 Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Locus tag: HMPREF0424_1124 Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
	HMPREF0424_1125	nrdD	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
	HMPREF0424_1124	nrdG	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD