Regulon of Fur in Staphylococcus carnosus subsp. carnosus TM300
| Regulator type: | Transcription factor |
| TF locus tag: | Sca_1124 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Regulog: | Fur - Staphylococcaceae |
| Statistics of regulated genes: | |
| - Genes | 28 |
| - Operons | 14 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By trascription factor - FUR
- By TF family - FUR
- By effector - Iron ion, (Fe2+)
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -222
Score: 6.4 Sequence: TATGATAATGATTATCAAT
Locus tag: Sca_0295
Name: fhuA Funciton: ferrichrome transport ATP-binding protein FhuA
Locus tag: Sca_0296
Name: fhuB Funciton: ferrichrome transport permease
Locus tag: Sca_0297
Name: fhuG Funciton: ferrichrome transport permease FhuG |
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fhuA
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ferrichrome transport ATP-binding protein FhuA
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fhuB
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ferrichrome transport permease
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fhuG
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ferrichrome transport permease FhuG
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Position: -51
Score: 6.2 Sequence: ATTGATAATAATAATCAAT
Locus tag: Sca_2028
Name: feoA Funciton: putative ferrous iron transport protein A
Locus tag: Sca_2029
Name: feoB Funciton: putative ferrous iron transport protein B |
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feoA
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putative ferrous iron transport protein A
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feoB
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putative ferrous iron transport protein B
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Position: -69
Score: 6.6 Sequence: ATTGATAACGATTATCAAT
Locus tag: Sca_2215
Name: efeO Funciton: Ferrous iron transport periplasmic protein EfeO
Locus tag: Sca_2214
Name: efeB Funciton: Ferrous iron transport peroxidase EfeB
Locus tag: Sca_2213
Name: efeU Funciton: Ferrous iron transport permease EfeU |
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efeO
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Ferrous iron transport periplasmic protein EfeO
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efeB
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Ferrous iron transport peroxidase EfeB
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efeU
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Ferrous iron transport permease EfeU
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Position: -190
Score: 5.6 Sequence: ATTGAAAACAATTCTCAAT
Locus tag: Sca_0991
Name: citB Funciton: aconitate hydratase |
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citB
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aconitate hydratase
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Position: -185
Score: 5.9 Sequence: ATTGATAATCATTTTCAAG
Position: -152
Score: 6.2 Sequence: ATTGATAATGATTGTCAAT
Locus tag: Sca_1060
Name: arlR Funciton: response regulator ArlR
Locus tag: Sca_1059
Name: arlS Funciton: signal transduction histidine kinase ArlS |
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arlR
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response regulator ArlR
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arlS
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signal transduction histidine kinase ArlS
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Position: -192
Score: 6.1 Sequence: AATGAGAATCGTTATCAAT
Locus tag: Sca_1680
Name: yfmC Funciton: iron(III) dicitrate ABC transporter binding protein
Locus tag: Sca_1679
Name: yfmD Funciton: iron(III) dicitrate ABC transporter permease component
Locus tag: Sca_1678
Name: yfmE Funciton: iron(III) dicitrate ABC transporter permease component |
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yfmC
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iron(III) dicitrate ABC transporter binding protein
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yfmD
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iron(III) dicitrate ABC transporter permease component
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yfmE
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iron(III) dicitrate ABC transporter permease component
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Position: -58
Score: 5.3 Sequence: GTTGAGAATAATTTTCAAT
Locus tag: Sca_1872
Name: trxB Funciton: ferredoxin--NADP reductase |
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trxB
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ferredoxin--NADP reductase
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Position: -63
Score: 6.2 Sequence: ATTGATAATCTTTATCATT
Locus tag: Sca_2211a
Name: tatA Funciton: putative sec-independent protein translocase
Locus tag: Sca_2212
Name: tatC Funciton: putative sec-independant protein translocase |
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tatA
|
putative sec-independent protein translocase
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tatC
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putative sec-independant protein translocase
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Position: -78
Score: 6.2 Sequence: AGTGATAATGATTATCAGT
Locus tag: Sca_0381
Name: sstA Funciton: putative siderophore ABC transporter permease
Locus tag: Sca_0382
Name: sstB Funciton: putative siderophore ABC transporter permease
Locus tag: Sca_0383
Name: sstC Funciton: putative siderophore ABC transporter ATP-binding protein
Locus tag: Sca_0384
Name: sstD Funciton: homolog of lipoprotein SstD |
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sstA
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putative siderophore ABC transporter permease
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sstB
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putative siderophore ABC transporter permease
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sstC
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putative siderophore ABC transporter ATP-binding protein
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sstD
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homolog of lipoprotein SstD
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Position: -42
Score: 6.8 Sequence: AATGATAATCATTATCAAT
Locus tag: Sca_1683
Name: SA1982 Funciton: putative permease of the major facilitator superfamily
Locus tag: Sca_1682
Name: iucC Funciton: putative aerobactin biosynthesis protein, IucA/IucC family
Locus tag: Sca_1681
Name: SA1980 Funciton: putative amino acid racemase |
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SA1982
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putative permease of the major facilitator superfamily
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iucC
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putative aerobactin biosynthesis protein, IucA/IucC family
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SA1980
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putative amino acid racemase
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Position: -39
Score: 6.7 Sequence: AATGATAATGATTATCATT
Locus tag: Sca_0449
Name: SA0757 Funciton: putative NAD(P)H nitroreductase |
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SA0757
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putative NAD(P)H nitroreductase
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Position: -83
Score: 6.8 Sequence: ATTGATAATGATTATCATT
Locus tag: Sca_1684
Name: iucB Funciton: putative aerobactin biosynthesis protein, IucA/IucC family |
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iucB
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putative aerobactin biosynthesis protein, IucA/IucC family
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Position: -144
Score: 6.2 Sequence: ATTGAGAATAATTATCATT
Locus tag: Sca_0030
Name: isdG Funciton: heme-degrading monooxygenase IsdG (Iron-regulatedsurface determinant isdG) (Iron-responsive surface determinant isdG)(Heme oxygenase) |
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isdG
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heme-degrading monooxygenase IsdG (Iron-regulatedsurface determinant isdG) (Iron-responsive surface determinant isdG)(Heme oxygenase)
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Position: -36
Score: 6.1 Sequence: AATGATAATCGTTTTCAAT
Locus tag: Sca_1778
Name: fhuD2 Funciton: ferric hydroxamate binding protein of ABC transporter |
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fhuD2
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ferric hydroxamate binding protein of ABC transporter
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |