Regulon of NagR in Bifidobacterium longum NCC2705

Properties
Regulator type:	Transcription factor
TF locus tag:	BL1342
Regulator family:	ROK
Regulation mode:
Biological process:	Lacto-N-biose utilization; Galacto-N-biose utilization
Effector:	N-acetylglucosamine-6-phosphate
Regulog:	NagR - Bifidobacteriaceae
Statistics of regulated genes:
- Genes	11
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 28 sites [see more]

Member of regulog collections

By taxonomy - Bifidobacteriaceae
By TF family - ROK
By effector - N-acetylglucosamine-6-phosphate
By pathway - Lacto-N-biose utilization
By pathway - Galacto-N-biose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -251 Score: 5.3 Sequence: AACTGTTATGAAACTTCACTAAT Position: -169 Score: 6.5 Sequence: AATTGTTAGTATCATTAACAAAT Locus tag: BL1343 Name: nagB Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Locus tag: BL1344 Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
	BL1343	nagB	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
	BL1344	nagA	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Position: -95 Score: 5.2 Sequence: AATTGTTAGCTAAGTTGACAATA Locus tag: BL1638 Name: lnbA Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, substrate-binding protein Locus tag: BL1639 Name: lnbB Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 1 Locus tag: BL1640 Name: lnbC Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 2 Locus tag: BL1641 Name: lnpA Funciton: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase (EC:2.4.1.211) Locus tag: BL1642 Name: nahK Funciton: N-acetylhexosamine 1-kinase (EC:2.7.1.162) Locus tag: BL1643 Name: galT2 Funciton: UDP-glucose--hexose-1-phosphate uridylyltransferase (EC:2.7.7.12) Locus tag: BL1644 Name: galE2 Funciton: UDP-glucose 4-epimerase (EC 5.1.3.2)
	BL1638	lnbA	Predicted galacto-N-biose-/lacto-N-biose ABC transporter, substrate-binding protein
	BL1639	lnbB	Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 1
	BL1640	lnbC	Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 2
	BL1641	lnpA	1,3-beta-galactosyl-N-acetylhexosamine phosphorylase (EC:2.4.1.211)
	BL1642	nahK	N-acetylhexosamine 1-kinase (EC:2.7.1.162)
	BL1643	galT2	UDP-glucose--hexose-1-phosphate uridylyltransferase (EC:2.7.7.12)
	BL1644	galE2	UDP-glucose 4-epimerase (EC 5.1.3.2)
Position: -191 Score: 6.5 Sequence: ATTTGTTAATGATACTAACAATT Position: -109 Score: 5.3 Sequence: ATTAGTGAAGTTTCATAACAGTT Locus tag: BL1342 Name: nagR Funciton: Transciptional regulator of lacto-N-biose and galacto-N-biose utilization, ROK family
	BL1342	nagR	Transciptional regulator of lacto-N-biose and galacto-N-biose utilization, ROK family
Position: -78 Score: 5.1 Sequence: ATTTGTTAAGATGGTTGTCAATA Locus tag: BL1341 Name: nagK Funciton: Predicted N-acetyl-glucosamine kinase, ROK family (EC 2.7.1.59)
	BL1341	nagK	Predicted N-acetyl-glucosamine kinase, ROK family (EC 2.7.1.59)

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