Profile of regulator NagR in Bifidobacteriaceae
Properties
| Regulator family: |
ROK |
| Regulation mode: |
|
| Biological process: |
Lacto-N-biose utilization; Galacto-N-biose utilization |
| Effector: |
N-acetylglucosamine-6-phosphate |
| Regulog: |
NagR - Bifidobacteriaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Bifidobacterium longum subsp. infantis ATCC 15697
|
|
Blon_2174 |
lnpA |
-31 |
4.1 |
TTTTGATGATCAACCTCACAAAG |
|
Blon_0881 |
nagB |
-169 |
6.5 |
AATTGTTAGTATCATTAACAAAT |
|
Blon_0881 |
nagB |
-251 |
5.5 |
AATTGTTATGAAACTTCACCAAT |
|
Blon_0879 |
nagK |
-78 |
5.3 |
ATTTGTTAAGATAGTTGTCAATA |
|
Blon_0880 |
nagR |
-191 |
6.5 |
ATTTGTTAATGATACTAACAATT |
|
Blon_0880 |
nagR |
-109 |
5.5 |
ATTGGTGAAGTTTCATAACAATT |
|
Blon_2177 |
lnbA |
-95 |
4.9 |
AATTGTTAGTTGGGTTGACAATA |
|
Blon_2177 |
lnbA |
-175 |
4 |
GTGAGTTAATGAAATGAACAAAC |
|
Bifidobacterium bifidum NCIMB 41171
|
|
BbifN4_010100004904 |
nahK |
-144 |
4.9 |
TTATGTAACTATAATTAACAAAT |
|
BbifN4_010100004949 |
lnbA |
-101 |
4.7 |
AAATGTTAATGTAGTTGACATTT |
|
BbifN4_010100002384 |
nagB |
-135 |
6.3 |
ATTAGTTAGTATCATTAACAAAT |
|
BbifN4_010100004909 |
nagR |
-168 |
4.9 |
ATTTGTTAATTATAGTTACATAA |
|
BbifN4_010100002379 |
nagR |
-138 |
6.3 |
ATTTGTTAATGATACTAACTAAT |
|
Bifidobacterium breve DSM 20213
|
|
BIFBRE_01707 |
nagR |
-116 |
5.5 |
ATTAGTGAAGTTCCCTAACAGAT |
|
BIFBRE_01706 |
nagB |
-180 |
5.5 |
ATCTGTTAGGGAACTTCACTAAT |
|
BIFBRE_00332 |
lnbA |
-96 |
5.2 |
AATTGTTAGTTAGGTTGACAATA |
|
BIFBRE_00332 |
lnbA |
-184 |
4.6 |
CTTTGTAAGGAGTATTAATAAAA |
|
BIFBRE_01706 |
nagB |
-100 |
6 |
AATTGTAAGTAGTATTAACAAAT |
|
BIFBRE_01708 |
nagK |
-78 |
5.3 |
ATTTGTTAAGATAGTTGTCAATA |
|
BIFBRE_00337 |
nahK |
-69 |
4.8 |
TTATGTATATATACTTAACAAAT |
|
BIFBRE_00635 |
galT2 |
-40 |
5.9 |
AATTGTTAGGGTAATTAACAATA |
|
BIFBRE_01707 |
nagR |
-196 |
6 |
ATTTGTTAATACTACTTACAATT |
|
Bifidobacterium longum NCC2705
|
|
BL1341 |
nagK |
-78 |
5.1 |
ATTTGTTAAGATGGTTGTCAATA |
|
BL1342 |
nagR |
-109 |
5.3 |
ATTAGTGAAGTTTCATAACAGTT |
|
BL1343 |
nagB |
-251 |
5.3 |
AACTGTTATGAAACTTCACTAAT |
|
BL1343 |
nagB |
-169 |
6.5 |
AATTGTTAGTATCATTAACAAAT |
|
BL1342 |
nagR |
-191 |
6.5 |
ATTTGTTAATGATACTAACAATT |
|
BL1638 |
lnbA |
-95 |
5.2 |
AATTGTTAGCTAAGTTGACAATA |
Export
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Regulatory Sites
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