Regulon of RafR in Bifidobacterium longum NCC2705
| Regulator type: | Transcription factor |
| TF locus tag: | BL1520 |
| Regulator family: | ROK |
| Regulation mode: | activator |
| Biological process: | Raffinose utilization |
| Effector: | |
| Regulog: | RafR - Bifidobacteriaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bifidobacteriaceae
- By TF family - ROK
- By pathway - Raffinose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -155
Score: 5.5 Sequence: TTTATTGCGTTAATCACAAAATA
Locus tag: BL1521
Name: rafB Funciton: Raffinose ABC transporter, substrate-binding protein
Locus tag: BL1522
Name: rafC Funciton: Raffinose ABC transporter, permease protein 1
Locus tag: BL1523
Name: rafD Funciton: Raffinose ABC transporter, permease protein 2 |
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rafB
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Raffinose ABC transporter, substrate-binding protein
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rafC
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Raffinose ABC transporter, permease protein 1
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rafD
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Raffinose ABC transporter, permease protein 2
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Position: -41
Score: 5.5 Sequence: TATTTTGTGATTAACGCAATAAA
Locus tag: BL1520
Name: rafR Funciton: Raffinose utilization transcriptional regulator, ROK family |
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rafR
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Raffinose utilization transcriptional regulator, ROK family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |