Profile of regulator RafR in Bifidobacteriaceae

Member of regulog collections

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Bifidobacterium longum subsp. infantis ATCC 15697
	Blon_2458	rafB	-152	5.5	TTTATTGCGTTAATCACAAAATA
	Blon_2459	rafR	-43	5.5	TATTTTGTGATTAACGCAATAAA
Bifidobacterium adolescentis ATCC 15703
	BAD_1574	rafB	-161	5.5	TACTTTCCAAGAATAACAAAATA
	BAD_1576	agaL	-104	5	TACTTTCCGAAAGAAACAAACAC
	BAD_1575	rafR	-47	5.5	TATTTTGTTATTCTTGGAAAGTA
Bifidobacterium angulatum DSM 20098
	BIFANG_00401	rafB	-230	4.2	TTCTTTCCTTCGATATGAAATTT
	BIFANG_00406	agaL	-104	5	TAGTTTCTGAAAACAAGAAACAC
	BIFANG_00405	rafR	-22	3.8	TAGTTACTCTTGGATAGTAAATA
Bifidobacterium animalis subsp. lactis AD011
	BLA_1522	rafB	-158	4.1	TAGTTTCCATGAGTATATAAATA
	BLA_1523	rafR	-13	4.1	TATTTATATACTCATGGAAACTA
Bifidobacterium breve DSM 20213
	BIFBRE_00616	rafB	-152	5.5	TTTATTGCGTTAATCACAAAATA
	BIFBRE_00617	rafR	-25	5.5	TATTTTGTGATTAACGCAATAAA
Bifidobacterium dentium Bd1
	BDP_2226	rafB	-159	5.3	TACTTTCTCAGAATAACAAAATC
	BDP_2229	agaL	-106	5.3	TACTTTCCGAAAATAAGAAACAC
	BDP_2227	rafR	-115	5.3	GATTTTGTTATTCTGAGAAAGTA
Bifidobacterium longum NCC2705
	BL1521	rafB	-155	5.5	TTTATTGCGTTAATCACAAAATA
	BL1520	rafR	-41	5.5	TATTTTGTGATTAACGCAATAAA

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --