Regulon of RafR in Bifidobacterium breve DSM 20213

Properties
Regulator type:	Transcription factor
TF locus tag:	BIFBRE_00617
Regulator family:	ROK
Regulation mode:	activator
Biological process:	Raffinose utilization
Effector:
Regulog:	RafR - Bifidobacteriaceae
Statistics of regulated genes:
- Genes	4
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 17 sites [see more]

Member of regulog collections

By taxonomy - Bifidobacteriaceae
By TF family - ROK
By pathway - Raffinose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -152 Score: 5.5 Sequence: TTTATTGCGTTAATCACAAAATA Locus tag: BIFBRE_00616 Name: rafB Funciton: Raffinose ABC transporter, substrate-binding protein Locus tag: BIFBRE_00615 Name: rafC Funciton: Raffinose ABC transporter, permease protein 1 Locus tag: BIFBRE_00614 Name: rafD Funciton: Raffinose ABC transporter, permease protein 2
	BIFBRE_00616	rafB	Raffinose ABC transporter, substrate-binding protein
	BIFBRE_00615	rafC	Raffinose ABC transporter, permease protein 1
	BIFBRE_00614	rafD	Raffinose ABC transporter, permease protein 2
Position: -25 Score: 5.5 Sequence: TATTTTGTGATTAACGCAATAAA Locus tag: BIFBRE_00617 Name: rafR Funciton: Raffinose utilization transcriptional regulator, ROK family
	BIFBRE_00617	rafR	Raffinose utilization transcriptional regulator, ROK family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD