Regulon of AraQ in Bifidobacterium angulatum DSM 20098
| Regulator type: | Transcription factor |
| TF locus tag: | BIFANG_00190 |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Central carbohydrate metabolism; Arabinose utilization; Arabinose oligosaccharide utilization |
| Effector: | |
| Regulog: | AraQ - Bifidobacteriaceae |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bifidobacteriaceae
- By TF family - LacI
- By pathway - Central carbohydrate metabolism
- By pathway - Arabinose utilization
- By pathway - Arabinose oligosaccharide utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -51
Score: 5.1 Sequence: ATGTGTTAGCGGTAACAACC
Locus tag: BIFANG_01641
Name: galM Funciton: Aldose 1-epimerase (EC 5.1.3.3) |
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galM
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Aldose 1-epimerase (EC 5.1.3.3)
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Position: -166
Score: 4.7 Sequence: AAACGAGAACGCTAACAGAA
Locus tag: BIFANG_01436
Name: tkt Funciton: Transketolase (EC 2.2.1.1) |
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tkt
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Transketolase (EC 2.2.1.1)
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Position: -347
Score: 5.3 Sequence: TTTTGAGAGCGTTCACATCA
Position: -176
Score: 5.4 Sequence: AAATGTGAGCGATAACATTT
Locus tag: BIFANG_00188
Name: araE Funciton: L-arabinose-proton symporter
Locus tag: BIFANG_00187
Name: araB Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BIFANG_00186
Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BIFANG_00185
Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4) |
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araE
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L-arabinose-proton symporter
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araB
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Ribulokinase (EC 2.7.1.16)
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araD
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L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
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araA
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L-arabinose isomerase (EC 5.3.1.4)
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Position: -102
Score: 4.7 Sequence: CGATGTGAGCGCTGCCAGTG
Locus tag: BIFANG_00987
Name: ldh Funciton: L-lactate dehydrogenase (EC 1.1.1.27) |
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ldh
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L-lactate dehydrogenase (EC 1.1.1.27)
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Position: -131
Score: 6.1 Sequence: AATTGTTAGCGCTCACATAA
Locus tag: BIFANG_01141
Name: pyk Funciton: Pyruvate kinase (EC 2.7.1.40) |
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pyk
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Pyruvate kinase (EC 2.7.1.40)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |