Profile of regulator AraQ in Bifidobacteriaceae
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Central carbohydrate metabolism; Arabinose utilization; Arabinose oligosaccharide utilization |
| Effector: | |
| Regulog: | AraQ - Bifidobacteriaceae |
Member of regulog collections
- By taxonomy - Bifidobacteriaceae
- By TF family - LacI
- By pathway - Central carbohydrate metabolism
- By pathway - Arabinose utilization
- By pathway - Arabinose oligosaccharide utilization
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Bifidobacterium longum subsp. infantis ATCC 15697 | |||||
| Blon_0423 | araQ | -110 | 5.5 | CAGTGTGAGCGCTAACGCAA | |
| Blon_2246 | malQ1 | -110 | 6.1 | CATTGTGAGCGCTCACATCT | |
| Blon_1745 | pyk | -127 | 6.1 | CAATGTGAGCGCTCACAACA | |
| Blon_2246 | malQ1 | -88 | 4.6 | CTGTGTGAGGGCTAAAAGTA | |
| Blon_1096 | tkt | -156 | 5.3 | CACTGTGAACGTTAACAGAA | |
| Blon_0896 | galM | -43 | 5.4 | GATTGTGAGCGGTAACAATC | |
| Blon_1761 | glgB | -108 | 5.3 | CTATGAGAGCGCTCACAACC | |
| Blon_2444 | malE | -227 | 5.1 | ATATGTTAGCGCTCTCATGA | |
| Blon_2289 | null | -144 | 4.9 | CCGTGTTAACGTTCACAACT | |
| Blon_2288 | null | -107 | 4.9 | AGTTGTGAACGTTAACACGG | |
| Blon_0840 | ldh | -160 | 5.3 | GTTTGGGAGCGCTAACAACC | |
| Blon_1836 | eno | -108 | 6 | CATTGTGAGCGCTAACACTA | |
| Blon_0900 | gap | -155 | 6.3 | AATTGTGAGCGCTCACAAAA | |
| Bifidobacterium adolescentis ATCC 15703 | |||||
| BAD_1079 | gap | -156 | 5.1 | GCATGTGAGCGTTCACTGAA | |
| BAD_1413 | araQ | -75 | 5.4 | GGTTGTTAGCGCTAACTGAA | |
| BAD_0431 | maa | -20 | 5.4 | TGGTGTGAGCGTTCACTATA | |
| BAD_1529 | PF07944 | -49 | 5.5 | GATTGTGAGCGTTAACAAGA | |
| BAD_0829 | tkt | -156 | 6.1 | AATTGTGAGCGCTAACAGCA | |
| BAD_1082 | galM | -57 | 5 | CATCGTGAGCGGTAACATAG | |
| BAD_0678 | pyk | -51 | 6.3 | AATTGTGAGCGCTCACAACA | |
| BAD_1117 | ldh | -23 | 6.2 | GTATGTGAGCGCTCACAAAA | |
| BAD_0645 | eno | -106 | 5.3 | GAGTGTGAGCGTTCACATGG | |
| BAD_1412 | araB | -82 | 5.3 | AATAGTGAGCGTTAACAGTG | |
| BAD_1412 | araB | -69 | 5.5 | AACAGTGAGCGCTAACATTC | |
| Bifidobacterium angulatum DSM 20098 | |||||
| BIFANG_00987 | ldh | -102 | 4.7 | CGATGTGAGCGCTGCCAGTG | |
| BIFANG_00188 | araE | -347 | 5.3 | TTTTGAGAGCGTTCACATCA | |
| BIFANG_01141 | pyk | -131 | 6.1 | AATTGTTAGCGCTCACATAA | |
| BIFANG_01436 | tkt | -166 | 4.7 | AAACGAGAACGCTAACAGAA | |
| BIFANG_01641 | galM | -51 | 5.1 | ATGTGTTAGCGGTAACAACC | |
| BIFANG_00188 | araE | -176 | 5.4 | AAATGTGAGCGATAACATTT | |
| Bifidobacterium animalis subsp. lactis AD011 | |||||
| BLA_1494 | pyk | -380 | 6 | GGTTGTGAGCGCTCACAGAC | |
| BLA_1030 | eno | -104 | 5.2 | TCGTGGGAGCGCTCACATTT | |
| BLA_0056 | araB | -70 | 5.9 | TTGTGTGAGCGCTAACATAT | |
| BLA_0056 | araB | -213 | 5 | TCATGTTACCGCTCACAAGA | |
| Bifidobacterium bifidum NCIMB 41171 | |||||
| BbifN4_010100004774 | tkt | -159 | 5.8 | ACTTGTGAGCGCTAACATAA | |
| BbifN4_010100001337 | gatC | -238 | 5.5 | ATATGTGAGCGCTCCCAATT | |
| BbifN4_010100003349 | pyk | -131 | 6.1 | AGATGTGAGCGCTCACAACA | |
| BbifN4_010100002254 | ldh | -163 | 5.8 | GTCTGTGAGCGTTCACAACA | |
| BbifN4_010100003174 | eno | -105 | 5.3 | GAATGTTAGCGCTCATATTA | |
| BbifN4_010100001372 | araQ | -122 | 5.4 | ATCTGTGAGCGCTCACGCGT | |
| BbifN4_010100002474 | galM | -44 | 4.5 | GATAGCGAGCGGTAACAATA | |
| BbifN4_010100001332 | sgaR | -130 | 5.5 | AATTGGGAGCGCTCACATAT | |
| BbifN4_010100002494 | gap | -155 | 5.3 | ATTTGTTAGCGTTAACGGAA | |
| Bifidobacterium breve DSM 20213 | |||||
| BIFBRE_01690 | gap | -155 | 6.2 | CAATGTGAGCGCTCACAAAA | |
| BIFBRE_01051 | pyk | -77 | 6 | CAGTGTGAGCGCTCACAACA | |
| BIFBRE_01332 | tkt | -156 | 5.8 | AATTGTGAACGCTAACAGAA | |
| BIFBRE_01694 | galM | -44 | 4.9 | GATTGCGAGCGGTAACAATA | |
| BIFBRE_01039 | glgB | -108 | 5.4 | CAATGAGAGCGCTCACAATC | |
| BIFBRE_00012 | malE | -229 | 4.9 | GCATGTTAGCGCTCTCATTG | |
| BIFBRE_00165 | null | -213 | 5.2 | CGGTGTGAACGCTCACACGT | |
| BIFBRE_00166 | null | -107 | 5.2 | ACGTGTGAGCGTTCACACCG | |
| BIFBRE_01807 | ldh | -160 | 5.9 | GGCTGTGAGCGCTAACAACT | |
| BIFBRE_01016 | eno | -108 | 6.1 | CATTGTGAGCGCTCACATCA | |
| BIFBRE_02212 | araQ | -146 | 5.4 | CAATGTGAGCGCTCACGCGA | |
| Bifidobacterium dentium Bd1 | |||||
| BDP_1924 | araB | -81 | 5.3 | AATAGTGAGCGTTAACAGTG | |
| BDP_1558 | ldh | -162 | 6.1 | GTTTGTGAGCGCTCACATCA | |
| BDP_0569 | maa | -49 | 5.5 | TTGCGTGAACGCTCACAACA | |
| BDP_1145 | tkt | -157 | 5.7 | CATTGTGAACGCTAACAGAA | |
| BDP_1518 | galM | -56 | 4.8 | GACCGTTAGCGGTAACAACC | |
| BDP_1926 | araQ | -75 | 5.1 | GCCTGTTAGCGCTAACTGAA | |
| BDP_0870 | eno | -106 | 5.5 | GTATGTGAGCGTTCACATGA | |
| BDP_1514 | gap | -156 | 5.5 | CATTGTGAGCGTTCACGGAA | |
| BDP_1924 | araB | -68 | 5.5 | AACAGTGAGCGCTAACATTC | |
| BDP_0904 | pyk | -126 | 6.2 | AAATGTGAGCGCTCACAACA | |
| Bifidobacterium gallicum DSM 20093 | |||||
| BIFGAL_00353 | pyk | -125 | 5.5 | CTATGTTAACGCTAACAACA | |
| BIFGAL_01223 | eno | -104 | 4.5 | ACATGTGAACACTCACTGCA | |
| BIFGAL_00651 | araB | -2 | 5.7 | AAATGTTAGCGCTAACATAC | |
| Bifidobacterium longum NCC2705 | |||||
| BL1363 | gap | -155 | 6.2 | AATTGTGAGCGCTCACAGAA | |
| BL0988 | pyk | -40 | 6.1 | CAATGTGAGCGCTCACAACA | |
| BL1570 | malQ1 | -110 | 6.1 | CATTGTGAGCGCTCACATCT | |
| BL0716 | tkt | -156 | 5.6 | CACTGTGAACGCTAACAGAA | |
| BL1359 | galM | -43 | 5.4 | GATTGTGAGCGATAACAATT | |
| BL0999 | glgB | -147 | 5.3 | CTATGAGAGCGCTCACAACC | |
| BL0141 | malE | -246 | 5.4 | ATATGTTAGCGCTCTCATAA | |
| BL1532 | null | -123 | 5 | CCATGTTAACGTTCACAACT | |
| BL1533 | null | -45 | 5 | AGTTGTGAACGTTAACATGG | |
| BL0275 | araQ | -71 | 5.5 | CAGTGTGAGCGCTAACGCAA | |
| BL1308 | ldh | -160 | 5.7 | ATTCGTGAGCGCTAACAACC | |
| BL0274 | araB | -70 | 5.8 | AATTGTGAGCGCTAACACCC | |
| BL1022 | eno | -108 | 5.6 | CATTGTGAGCGCTAACGCTA | |
| Gardnerella vaginalis 409-05 | |||||
| HMPREF0424_0607 | pyk | -146 | 6 | TTCTGTGAGCGTTCACAAAA | |
| HMPREF0424_0662 | eno | -106 | 5.3 | TATTGTGAACGTTCACGGCA | |
| HMPREF0424_0471 | gap | -161 | 4.9 | GCATGTTAACGCTCACTGTT | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |