Regulon of AraQ in Bifidobacterium adolescentis ATCC 15703
| Regulator type: | Transcription factor |
| TF locus tag: | BAD_1413 |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Central carbohydrate metabolism; Arabinose utilization; Arabinose oligosaccharide utilization |
| Effector: | |
| Regulog: | AraQ - Bifidobacteriaceae |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bifidobacteriaceae
- By TF family - LacI
- By pathway - Central carbohydrate metabolism
- By pathway - Arabinose utilization
- By pathway - Arabinose oligosaccharide utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -106
Score: 5.3 Sequence: GAGTGTGAGCGTTCACATGG
Locus tag: BAD_0645
Name: eno Funciton: Enolase (EC 4.2.1.11) |
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eno
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Enolase (EC 4.2.1.11)
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Position: -23
Score: 6.2 Sequence: GTATGTGAGCGCTCACAAAA
Locus tag: BAD_1117
Name: ldh Funciton: L-lactate dehydrogenase (EC 1.1.1.27) |
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ldh
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L-lactate dehydrogenase (EC 1.1.1.27)
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Position: -156
Score: 5.1 Sequence: GCATGTGAGCGTTCACTGAA
Locus tag: BAD_1079
Name: gap Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
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gap
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NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
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Position: -75
Score: 5.4 Sequence: GGTTGTTAGCGCTAACTGAA
Locus tag: BAD_1413
Name: araQ Funciton: Transcriptional regulator of central carbohydrate metabolism, LacI family |
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araQ
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Transcriptional regulator of central carbohydrate metabolism, LacI family
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Position: -82
Score: 5.3 Sequence: AATAGTGAGCGTTAACAGTG
Position: -69
Score: 5.5 Sequence: AACAGTGAGCGCTAACATTC
Locus tag: BAD_1412
Name: araB Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BAD_1411
Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BAD_1410
Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4) |
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araB
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Ribulokinase (EC 2.7.1.16)
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araD
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L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
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araA
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L-arabinose isomerase (EC 5.3.1.4)
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Position: -49
Score: 5.5 Sequence: GATTGTGAGCGTTAACAAGA
Locus tag: BAD_1529
Name: PF07944 Funciton: Putative glycosyl hydrolase of unknown function (DUF1680)
Locus tag: BAD_1528
Name: aga Funciton: Alpha-galactosidase (EC 3.2.1.22) |
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PF07944
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Putative glycosyl hydrolase of unknown function (DUF1680)
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aga
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Alpha-galactosidase (EC 3.2.1.22)
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Position: -20
Score: 5.4 Sequence: TGGTGTGAGCGTTCACTATA
Locus tag: BAD_0431
Name: maa Funciton: Maltose O-acetyltransferase (EC 2.3.1.79) |
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maa
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Maltose O-acetyltransferase (EC 2.3.1.79)
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Position: -57
Score: 5 Sequence: CATCGTGAGCGGTAACATAG
Locus tag: BAD_1082
Name: galM Funciton: Aldose 1-epimerase (EC 5.1.3.3) |
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galM
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Aldose 1-epimerase (EC 5.1.3.3)
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Position: -156
Score: 6.1 Sequence: AATTGTGAGCGCTAACAGCA
Locus tag: BAD_0829
Name: tkt Funciton: Transketolase (EC 2.2.1.1)
Locus tag: BAD_0830
Name: tal Funciton: Transaldolase (EC 2.2.1.2) |
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tkt
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Transketolase (EC 2.2.1.1)
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tal
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Transaldolase (EC 2.2.1.2)
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Position: -51
Score: 6.3 Sequence: AATTGTGAGCGCTCACAACA
Locus tag: BAD_0678
Name: pyk Funciton: Pyruvate kinase (EC 2.7.1.40) |
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pyk
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Pyruvate kinase (EC 2.7.1.40)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |