Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of GosR in Bifidobacterium dentium Bd1

Properties
Regulator type: Transcription factor
TF locus tag: BDP_1907
Regulator family: LacI
Regulation mode:
Biological process: Galactooligosaccharide utilization; Galactan utilization
Effector: Galactobiose
Regulog: GosR - Bifidobacteriaceae
Statistics of regulated genes:
- Genes 5
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 17 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -72
Score: 6.2
Sequence: TTGCTACACCGTTGTATCAT
Locus tag: BDP_1908
Name: bgaB
Funciton: Beta-galactosidase (EC 3.2.1.23), GH42 family
bgaB
Beta-galactosidase (EC 3.2.1.23), GH42 family

Position: -29
Score: 5.8
Sequence: TTGGTACAACGGTGTCTCTA
Locus tag: BDP_2054
Name: galA
Funciton: Arabinogalactan endo-beta-1,4-galactanase (EC 3.2.1.89)
galA
Arabinogalactan endo-beta-1,4-galactanase (EC 3.2.1.89)

Position: -216
Score: 5.9
Sequence: TTGATACAGCTGTGTATCAT
Position: -188
Score: 5.8
Sequence: ATGATACACAGTTGTATCAG
Position: -98
Score: 6
Sequence: TTGGTACAGCGGTATATCAA
Locus tag: BDP_1911
Name: gosB
Funciton: Putative galactooligosaccharide ABC transporter, substrate-binding component
Locus tag: BDP_1910
Name: gosC
Funciton: Putative galactooligosaccharide ABC transporter, permease component 1
Locus tag: BDP_1909
Name: gosD
Funciton: Putative galactooligosaccharide ABC transporter, permease component 2
gosB
Putative galactooligosaccharide ABC transporter, substrate-binding component
gosC
Putative galactooligosaccharide ABC transporter, permease component 1
gosD
Putative galactooligosaccharide ABC transporter, permease component 2
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD