Profile of regulator GosR in Bifidobacteriaceae
Properties
| Regulator family: |
LacI |
| Regulation mode: |
|
| Biological process: |
Galactooligosaccharide utilization; Galactan utilization |
| Effector: |
Galactobiose |
| Regulog: |
GosR - Bifidobacteriaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Bifidobacterium adolescentis ATCC 15703
|
|
BAD_1405 |
gosB2 |
-159 |
5.3 |
CAGGTACACAGTTATACCAA |
|
BAD_1401 |
bgaB |
-60 |
6.1 |
ATGCTACACCGGTGTACCAC |
|
BAD_1405 |
gosB2 |
-190 |
4.9 |
ATGGTACACCGGAAAACCTA |
|
Bifidobacterium angulatum DSM 20098
|
|
BIFANG_00156 |
bgaB |
17 |
5.9 |
GTGGTACAACTGTGTATCAT |
|
Bifidobacterium bifidum NCIMB 41171
|
|
BbifN4_010100001412 |
null |
-39 |
4.9 |
CTGGTATAGCGGTGCATCAT |
|
BbifN4_010100001412 |
null |
-11 |
6.1 |
TTGATACTCCGTTGTATCAA |
|
Bifidobacterium breve DSM 20213
|
|
BIFBRE_02223 |
gosB |
-260 |
6.3 |
TTGGTACACAGGTGTATCAT |
|
BIFBRE_02223 |
gosB |
-232 |
5.6 |
TTGGTACATGGGTGTACCAA |
|
Bifidobacterium dentium Bd1
|
|
BDP_1911 |
gosB |
-216 |
5.9 |
TTGATACAGCTGTGTATCAT |
|
BDP_1911 |
gosB |
-188 |
5.8 |
ATGATACACAGTTGTATCAG |
|
BDP_1911 |
gosB |
-98 |
6 |
TTGGTACAGCGGTATATCAA |
|
BDP_2054 |
galA |
-29 |
5.8 |
TTGGTACAACGGTGTCTCTA |
|
BDP_1908 |
bgaB |
-72 |
6.2 |
TTGCTACACCGTTGTATCAT |
|
Bifidobacterium longum NCC2705
|
|
BL0257 |
galA |
-97 |
5 |
GTGGTACACAGCTGTACCGC |
|
BL0262 |
gosB |
-253 |
6.1 |
TTGGTACACGGGTGTACCAA |
|
BL0262 |
gosB |
-281 |
6.3 |
TTGGTACACAGGTGTATCAT |
|
BL0257 |
galA |
-147 |
5.8 |
TTGATACACCGGTTGACCAA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
