Regulon of PdxR3 in Nakamurella multipartita DSM 44233
| Regulator type: | Transcription factor |
| TF locus tag: | Namu_3402, Namu_1043 |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine biosynthesis |
| Effector: | |
| Regulog: | PdxR3 - Frankineae/Propionibacterineae/Pseudonocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 1 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
- By trascription factor - PdxR
- By TF family - GntR/MocR
- By pathway - Pyridoxine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -61
Score: 12.4 Sequence: CAGACCAGTTT-(4)-CAACTGGTACT-(7)-CAGACCACATT
Locus tag: Namu_3401
Name: COG2364 Funciton: putative integral membrane protein
Locus tag: Namu_3400
Name: Amir_5405 Funciton: putative integral membrane protein
Locus tag: Namu_3399
Name: pdxT Funciton: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
Locus tag: Namu_3398
Name: Amir_2110 Funciton: protein of unknown function DUF28 |
|||
|
COG2364
|
putative integral membrane protein
|
||
|
Amir_5405
|
putative integral membrane protein
|
||
|
pdxT
|
Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
|
||
|
Amir_2110
|
protein of unknown function DUF28
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |