Regulon of TreR in Shewanella woodyi ATCC 51908
| Regulator type: | Transcription factor |
| TF locus tag: | Swoo_1435 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Trehalose utilization |
| Effector: | Trehalose |
| Regulog: | TreR - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By TF family - LacI
- By effector - Trehalose
- By pathway - Trehalose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -73
Score: 6.4 Sequence: TTTTGCAATCGTTTGCAAAA
Locus tag: Swoo_1437
Name: treP Funciton: Trehalose phosphorylase (EC 2.4.1.64)
Locus tag: Swoo_1436
Name: pgm2 Funciton: beta-phosphoglucomutase |
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treP
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Trehalose phosphorylase (EC 2.4.1.64)
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pgm2
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beta-phosphoglucomutase
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Position: -106
Score: 6 Sequence: GCTTGCAAACGATTGCAATT
Position: -83
Score: 6.4 Sequence: TTTTGCAATCGTTTGCATTT
Locus tag: Swoo_1435
Name: treR Funciton: Transcriptional regulator of trehalose utilization, LacI family |
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treR
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Transcriptional regulator of trehalose utilization, LacI family
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Position: -160
Score: 6.4 Sequence: AAATGCAAACGATTGCAAAA
Position: -137
Score: 6 Sequence: AATTGCAATCGTTTGCAAGC
Locus tag: Swoo_1434
Name: omp(Tre) Funciton: Trehalose-regulated TonB-dependent outer membrane receptor |
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omp(Tre)
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Trehalose-regulated TonB-dependent outer membrane receptor
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Position: -175
Score: 6.4 Sequence: TTTTGCAAACGATTGCAAAA
Locus tag: Swoo_1438
Name: treT Funciton: Predicted trehalose permease, MFS family, FucP subfamily |
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treT
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Predicted trehalose permease, MFS family, FucP subfamily
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |