Profile of regulator TreR in Shewanellaceae
Properties
| Regulator family: |
LacI |
| Regulation mode: |
repressor |
| Biological process: |
Trehalose utilization |
| Effector: |
Trehalose |
| Regulog: |
TreR - Shewanellaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Shewanella frigidimarina NCIMB 400
|
|
Sfri_3504 |
treR |
-103 |
6.5 |
TTATGCAAACGTTTGCATTT |
|
Sfri_3504 |
treR |
-126 |
6.4 |
CAATGCAAACGTTTGCAATA |
|
Sfri_3503 |
omp(Tre) |
-110 |
6.4 |
TATTGCAAACGTTTGCATTG |
|
Sfri_3505 |
treT |
-72 |
6.5 |
AAATGCAAACGATTGCATTA |
|
Sfri_3503 |
omp(Tre) |
-133 |
6.5 |
AAATGCAAACGTTTGCATAA |
|
Shewanella woodyi ATCC 51908
|
|
Swoo_1435 |
treR |
-106 |
6 |
GCTTGCAAACGATTGCAATT |
|
Swoo_1437 |
treP |
-73 |
6.4 |
TTTTGCAATCGTTTGCAAAA |
|
Swoo_1438 |
treT |
-175 |
6.4 |
TTTTGCAAACGATTGCAAAA |
|
Swoo_1434 |
omp(Tre) |
-160 |
6.4 |
AAATGCAAACGATTGCAAAA |
|
Swoo_1434 |
omp(Tre) |
-137 |
6 |
AATTGCAATCGTTTGCAAGC |
|
Swoo_1435 |
treR |
-83 |
6.4 |
TTTTGCAATCGTTTGCATTT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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|
