Regulon of FixK in Phenylobacterium zucineum HLK1
| Regulator type: | Transcription factor |
| TF locus tag: | PHZ_p0186, PHZ_c2798 |
| Regulator family: | CRP |
| Regulation mode: | activator (repressor) |
| Biological process: | Oxidative stress response; Nitrogen fixation |
| Effector: | Oxygen |
| Regulog: | FixK - Caulobacterales |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Caulobacterales
- By trascription factor - FnrN/FixK
- By TF family - CRP
- By effector - Oxygen
- By pathway - Oxidative stress response
- By pathway - Nitrogen fixation
| Locus Tag | Name | Function | |
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Position: -52
Score: 5.3 Sequence: TCCTTGATCTGAATCAGGGC
Locus tag: PHZ_c2806
Name: hemN Funciton: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) |
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hemN
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Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)
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Position: -40
Score: 6 Sequence: GCCTTGACCGATATCAAGGC
Locus tag: PHZ_c2814
Name: ccoN Funciton: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1)
Locus tag: PHZ_c2813
Name: ccoO Funciton: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1)
Locus tag: PHZ_c2812
Name: ccoQ Funciton: Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1)
Locus tag: PHZ_c2811
Name: ccoP Funciton: Cytochrome c oxidase subunit CcoP (EC 1.9.3.1)
Locus tag: PHZ_c2810
Name: ccoG Funciton: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation
Locus tag: PHZ_c2809
Name: ccoH Funciton: Type cbb3 cytochrome oxidase biogenesis protein CcoH
Locus tag: PHZ_c2808
Name: ccoI Funciton: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4)
Locus tag: PHZ_c2807
Name: ccoS Funciton: Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion |
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ccoN
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Cytochrome c oxidase subunit CcoN (EC 1.9.3.1)
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ccoO
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Cytochrome c oxidase subunit CcoO (EC 1.9.3.1)
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ccoQ
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Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1)
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ccoP
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Cytochrome c oxidase subunit CcoP (EC 1.9.3.1)
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ccoG
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Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation
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ccoH
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Type cbb3 cytochrome oxidase biogenesis protein CcoH
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ccoI
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Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4)
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ccoS
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Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion
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Position: -136
Score: 5 Sequence: GATGTGACGGCGATCAAAGC
Locus tag: PHZ_c2798
Name: fixK Funciton: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family |
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fixK
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Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |